382d7a0dacd948be55a2aa8548db7542a5e3335a
max
  Thu Feb 18 06:31:43 2021 -0800
fixing cadd deletions and inserts, refs #18492

diff --git src/hg/makeDb/doc/hg19.txt src/hg/makeDb/doc/hg19.txt
index 08a2824..34d3d10 100644
--- src/hg/makeDb/doc/hg19.txt
+++ src/hg/makeDb/doc/hg19.txt
@@ -34379,15 +34379,19 @@
 
 #############################################################################
 # CADD, max Wed Feb 10 06:08:01 PST 2021
 cd /hive/data/genomes/hg19/bed/cadd/
 wget https://krishna.gs.washington.edu/download/CADD/v1.6/GRCh37/InDels.tsv.gz
 wget https://krishna.gs.washington.edu/download/CADD/v1.6/GRCh37/whole_genome_SNVs.tsv.gz
 time python ~/kent/src/hg/makeDb/cadd/caddToBed.py InDels.tsv.gz
 time python ~/kent/src/hg/makeDb/cadd/caddToWig.py
 wigToBigWig a.wig ../../chrom.sizes a.bw  &
 wigToBigWig c.wig ../../chrom.sizes c.bw  &
 wigToBigWig a.wig ../../chrom.sizes a.bw &
 wigToBigWig g.wig ../../chrom.sizes g.bw &
 bedToBigBed ins.bed ../../chrom.sizes ins.bb -type=bed9+ -tab -as=${HOME}/kent/src/hg/makeDb/cadd/cadd.as
 bedToBigBed del.bed ../../chrom.sizes del.bb -type=bed9+ -tab -as=${HOME}/kent/src/hg/makeDb/cadd/cadd.as
 rm -f *.wig *.bed
+# for the next release:
+# don't forget to copy the new files to /usr/local/apache/htdocs-hgdownload/goldenPath/archive/hg19/cadd/<version>
+# and update the "current" symlink
+# also add a section "Archived Data" to the docs page with a link to the hgdownload archive directory