d63e61cdc4fa118eee44f5074a7f5bf0aeb0f5df gperez2 Fri Mar 19 00:38:12 2021 -0700 Organized the hg19 and hg38 non-default tracks in alphabetical order, refs #19187 diff --git src/hg/makeDb/trackDb/human/trackDb.geneHancer.ra src/hg/makeDb/trackDb/human/trackDb.geneHancer.ra index da1786e..db78749 100644 --- src/hg/makeDb/trackDb/human/trackDb.geneHancer.ra +++ src/hg/makeDb/trackDb/human/trackDb.geneHancer.ra @@ -1,125 +1,124 @@ track geneHancer compositeTrack on shortLabel GeneHancer longLabel GeneHancer Regulatory Elements and Gene Interactions subGroup1 view View a_GH=Regulatory_Elements b_TSS=Gene_TSS c_I=Interactions d_I=Clusters subGroup2 set Set a_ELITE=Double_Elite b_ALL=All sortOrder set=+ view=+ dimensions dimX=set dimY=view type bed 3 visibility hide dataVersion January 2019 (V2: Corrections to Experiment field) group regulation tableBrowser noGenome -priority 1.5 track ghGeneTss type bigBed 9 shortLabel Gene TSS view b_TSS itemRgb on searchIndex name url http://www.genecards.org/cgi-bin/carddisp.pl?gene=$$ urlLabel In GeneCards: visibility pack parent geneHancer track geneHancerGenesDoubleElite shortLabel GH genes TSS (DE) longLabel GeneCards genes TSS (Double Elite) bigDataUrl /gbdb/$D/geneHancer/geneHancerGenesTssDoubleElite.$D.bb type bigBed 9 parent ghGeneTss on subGroups set=a_ELITE view=b_TSS track geneHancerGenes shortLabel GH genes TSS longLabel GH genes TSS bigDataUrl /gbdb/$D/geneHancer/geneHancerGenesTssAll.$D.bb type bigBed 9 urlLabel In GeneCards: parent ghGeneTss off subGroups set=b_ALL view=b_TSS track ghGeneHancer type bigBed 9 + shortLabel Reg Elem view a_GH itemRgb on searchIndex name url http://www.genecards.org/Search/Keyword?queryString=$$ urlLabel In GeneCards: visibility dense exonArrows off mouseOverField elementType parent geneHancer track geneHancerRegElementsDoubleElite shortLabel GH Reg Elems (DE) longLabel Enhancers and promoters from GeneHancer (Double Elite) bigDataUrl /gbdb/$D/geneHancer/geneHancerRegElementsDoubleElite.$D.bb parent ghGeneHancer on subGroups set=a_ELITE view=a_GH track geneHancerRegElements shortLabel GH Reg Elems longLabel Enhancers and promoters from GeneHancer bigDataUrl /gbdb/$D/geneHancer/geneHancerRegElementsAll.$D.bb parent ghGeneHancer off subGroups set=b_ALL view=a_GH track ghInteraction shortLabel Interactions type bigInteract interactDirectional offsetTarget interactMultiRegion on view c_I viewUi on maxHeightPixels 50:100:200 url https://www.genecards.org/cgi-bin/carddisp.pl?gene=$&keywords=$&prefilter=enhancers#enhancers urlLabel Interaction in GeneCards visibility full parent geneHancer track geneHancerInteractionsDoubleElite shortLabel GH Interactions (DE) longLabel Interactions between GeneHancer regulatory elements and genes (Double Elite) bigDataUrl /gbdb/$D/geneHancer/geneHancerInteractionsDoubleElite.v2.$D.bb urlLabel Interaction in GeneCards parent ghInteraction on subGroups set=a_ELITE view=c_I track geneHancerInteractions shortLabel GH Interactions longLabel Interactions between GeneHancer regulatory elements and genes bigDataUrl /gbdb/$D/geneHancer/geneHancerInteractionsAll.v2.$D.bb urlLabel Interaction in GeneCards parent ghInteraction off subGroups set=b_ALL view=c_I track ghClusteredInteraction shortLabel Clustered Interactions type bigInteract interactDirectional clusterTarget interactMultiRegion on view d_I url https://www.genecards.org/cgi-bin/carddisp.pl?gene=$&keywords=$&prefilter=enhancers#enhancers urlLabel Interaction in GeneCards visibility pack parent geneHancer track geneHancerClusteredInteractionsDoubleElite shortLabel GH Clusters (DE) longLabel Clustered interactions of GeneHancer regulatory elements and genes (Double Elite) bigDataUrl /gbdb/$D/geneHancer/geneHancerInteractionsDoubleElite.v2.$D.bb urlLabel Interaction in GeneCards parent ghClusteredInteraction on subGroups set=a_ELITE view=d_I track geneHancerClusteredInteractions shortLabel GH Clusters longLabel Clustered interactions of GeneHancer regulatory elements and genes bigDataUrl /gbdb/$D/geneHancer/geneHancerInteractionsAll.v2.$D.bb urlLabel Interaction in GeneCards parent ghClusteredInteraction off subGroups set=b_ALL view=d_I