7ffff6bd3e03eb510a4324993ab2da5812bd036d gperez2 Wed Jan 27 10:11:04 2021 -0800 Fixed some typos, refs #26658 diff --git src/hg/htdocs/goldenPath/help/hubQuickStartAssembly.html src/hg/htdocs/goldenPath/help/hubQuickStartAssembly.html index 999ae48..e860cd4 100755 --- src/hg/htdocs/goldenPath/help/hubQuickStartAssembly.html +++ src/hg/htdocs/goldenPath/help/hubQuickStartAssembly.html @@ -154,31 +154,31 @@ gfServer index myGenome.untrans.gfidx myGenome.2bit gfServer index -trans myGenome.trans.gfidx myGenome.2bit
The files names in the form:
$rootdir/jillLab/myGenome.2bit $rootdir/jillLab/myGenome.untrans.gfidx $rootdir/jillLab/myGenome.trans.gfidx
-For for more deeply nest directory, for instance, the following the NCBI +For a more deeply nest directory, for instance, the following NCBI convention:
transBlat yourLab.yourInstitution.edu 4096 dynamic GCF/000/181/335/GCF_000181335.3 blat yourLab.yourInstitution.edu 4096 dynamic GCF/000/181/335/GCF_000181335.3
will reference these genome files:
$rootdir/GCF/000/181/335/GCF_000181335.3/GCF_000181335.3.2bit $rootdir/GCF/000/181/335/GCF_000181335.3/GCF_000181335.3.untrans.gfidx $rootdir/GCF/000/181/335/GCF_000181335.3/GCF_000181335.3.trans.gfidx