f89e2ac7a39cfb44eced889683439b4d3855e29b
hiram
  Mon Mar 1 13:13:56 2021 -0800
Added xenTro10 xenTro refs #24693

diff --git src/hg/makeDb/genbank/etc/genbank.conf src/hg/makeDb/genbank/etc/genbank.conf
index 9e510ea..0ef4024 100644
--- src/hg/makeDb/genbank/etc/genbank.conf
+++ src/hg/makeDb/genbank/etc/genbank.conf
@@ -4043,30 +4043,49 @@
 xenLae2.perChromTables = no
 xenLae2.downloadDir = xenLae2
 # xenLae2.mgc = yes
 xenLae2.refseq.mrna.native.pslCDnaFilter  = ${finished.refseq.mrna.native.pslCDnaFilter}
 xenLae2.refseq.mrna.xeno.pslCDnaFilter    = ${finished.refseq.mrna.xeno.pslCDnaFilter}
 xenLae2.genbank.mrna.native.pslCDnaFilter = ${finished.genbank.mrna.native.pslCDnaFilter}
 xenLae2.genbank.mrna.xeno.pslCDnaFilter   = ${finished.genbank.mrna.xeno.pslCDnaFilter}
 xenLae2.genbank.est.native.pslCDnaFilter  = ${finished.genbank.est.native.pslCDnaFilter}
 # DO NOT NEED genbank.mrna.xeno except for human, mouse
 # defaults yes: genbank.mrna.native.load, genbank.mrna.native.loadDesc,
 # genbank.est.native.load, refseq.mrna.native.load, refseq.mrna.native.loadDesc,
 # refseq.mrna.xeno.load , refseq.mrna.xeno.loadDesc
 # xenLae2.upstreamGeneTbl = ensGene
 # xenLae2.upstreamMaf = multiz9way /hive/data/genomes/xenTro7/bed/multiz9way/species.list
 
+# xenTro10 'Xenopus tropicalis' GCF_000004195.4_UCB_Xtro_10.0
+xenTro10.serverGenome = /hive/data/genomes/xenTro10/xenTro10.2bit
+xenTro10.ooc = /hive/data/genomes/xenTro10/jkStuff/xenTro10.11.ooc
+xenTro10.lift = /hive/data/genomes/xenTro10/jkStuff/xenTro10.gaps.lft
+xenTro10.perChromTables = no
+xenTro10.downloadDir = xenTro10
+# xenTro10.mgc = yes
+xenTro10.refseq.mrna.native.pslCDnaFilter  = ${finished.refseq.mrna.native.pslCDnaFilter}
+xenTro10.refseq.mrna.xeno.pslCDnaFilter    = ${finished.refseq.mrna.xeno.pslCDnaFilter}
+xenTro10.genbank.mrna.native.pslCDnaFilter = ${finished.genbank.mrna.native.pslCDnaFilter}
+xenTro10.genbank.mrna.xeno.pslCDnaFilter   = ${finished.genbank.mrna.xeno.pslCDnaFilter}
+xenTro10.genbank.est.native.pslCDnaFilter  = ${finished.genbank.est.native.pslCDnaFilter}
+# DO NOT NEED genbank.mrna.xeno except for human, mouse
+# defaults yes: genbank.mrna.native.load, genbank.mrna.native.loadDesc,
+# genbank.est.native.load, refseq.mrna.native.load, refseq.mrna.native.loadDesc,
+# refseq.mrna.xeno.load , refseq.mrna.xeno.loadDesc
+# xenTro10.upstreamGeneTbl = ensGene
+# xenTro10.upstreamMaf = multiz9way /hive/data/genomes/xenTro7/bed/multiz9way/species.list
+
 # xenTro9 'Xenopus tropicalis' 11 chroms + 6811 contigs
 xenTro9.serverGenome = /hive/data/genomes/xenTro9/xenTro9.2bit
 xenTro9.ooc = /hive/data/genomes/xenTro9/jkStuff/xenTro9.11.ooc
 xenTro9.lift = no
 xenTro9.perChromTables = no
 xenTro9.downloadDir = xenTro9
 # xenTro9.mgc = yes
 xenTro9.refseq.mrna.native.pslCDnaFilter  = ${finished.refseq.mrna.native.pslCDnaFilter}
 xenTro9.refseq.mrna.xeno.pslCDnaFilter    = ${finished.refseq.mrna.xeno.pslCDnaFilter}
 xenTro9.genbank.mrna.native.pslCDnaFilter = ${finished.genbank.mrna.native.pslCDnaFilter}
 xenTro9.genbank.mrna.xeno.pslCDnaFilter   = ${finished.genbank.mrna.xeno.pslCDnaFilter}
 xenTro9.genbank.est.native.pslCDnaFilter  = ${finished.genbank.est.native.pslCDnaFilter}
 # DO NOT NEED genbank.mrna.xeno except for human, mouse
 # defaults yes: genbank.mrna.native.load, genbank.mrna.native.loadDesc,
 # genbank.est.native.load, refseq.mrna.native.load, refseq.mrna.native.loadDesc,