a1c950cde18a4b977dc47c4528dfa6a9357a1f0f
jcarmstr
  Mon Jul 13 19:13:08 2015 -0700
Option for gfServer to save index as an mmap file on disk to speed startup.

diff --git src/gfServer/makefile src/gfServer/makefile
index cbf4a2a..7f6a6ec 100644
--- src/gfServer/makefile
+++ src/gfServer/makefile
@@ -3,20 +3,22 @@
 preMyLibs += ../lib/$(MACHTYPE)/jkOwnLib.a
 include $(kentSrc)/inc/userApp.mk
 L += -lm $(SOCKETLIB)
 
 test::
 	${MKDIR} tests/output
 	${DESTBINDIR}/${A} direct tests/input/mCrea.mrna tests/input/hCreaGeno.nib \
 		tests/input/mCreaGeno.nib > tests/output/testNib
 	${DESTBINDIR}/${A} direct tests/input/mCrea.mrna tests/input/creaGeno.2bit \
 		>tests/output/testTwoBit
 	cd tests && ./testProtNib output/testProtNib
 	cd tests && ./testProtTwoBit output/testProtTwoBit
 	cd tests && ./testTransNib output/testTransNib
 	cd tests && ./testTransTwoBit output/testTransTwoBit
 	cd tests && ./testPcr output/testPcr
-	diff -r -x CVS tests/expected tests/output
+	cd tests && ./testIndexFile output/testIndexFile
+	cd tests && ./testIndexFileTrans output/testIndexFileTrans
+	diff -r -x '*.blatidx' tests/expected tests/output
 	rm -r tests/output
 
 clean::
 	rm -fr ${O} tests/output