a74c645505a135d5c1e923afe477cdeb9c15bded
markd
  Wed Jul 8 22:27:42 2020 -0700
added including multiple container directoies in genome dir path to gfServer

diff --git src/gfClient/gfClient.c src/gfClient/gfClient.c
index 77efe39..fe2cdef 100644
--- src/gfClient/gfClient.c
+++ src/gfClient/gfClient.c
@@ -66,31 +66,32 @@
   "                 mismatches minus some sort of gap penalty.  Default is 30.\n"
   "   -minIdentity=N   Sets minimum sequence identity (in percent).  Default is\n"
   "                 90 for nucleotide searches, 25 for protein or translated\n"
   "                 protein searches.\n"
   "   -out=type     Controls output file format.  Type is one of:\n"
   "                   psl - Default.  Tab-separated format without actual sequence\n"
   "                   pslx - Tab-separated format with sequence\n"
   "                   axt - blastz-associated axt format\n"
   "                   maf - multiz-associated maf format\n"
   "                   sim4 - similar to sim4 format\n"
   "                   wublast - similar to wublast format\n"
   "                   blast - similar to NCBI blast format\n"
   "                   blast8- NCBI blast tabular format\n"
   "                   blast9 - NCBI blast tabular format with comments\n"
   "   -maxIntron=N   Sets maximum intron size. Default is %d.\n"
-  "   -genome=name   When using a dynamic gfServer, this is the name of the genome to query\n",
+  "   -genome=name   When using a dynamic gfServer, this is the name of the genome to query.\n"
+  "                  It maybe prefixed by containing directory as needed (see gfServer).\n",
   gfVersion, ffIntronMaxDefault);
 exit(-1);
 }
 
 
 struct gfOutput *gvo;
 
 void gfClient(char *hostName, char *portName, char *tSeqDir, char *inName, 
 	char *outName, char *tTypeName, char *qTypeName)
 /* gfClient - A client for the genomic finding program that produces a .psl file. */
 {
 struct lineFile *lf = lineFileOpen(inName, TRUE);
 static bioSeq seq;
 FILE *out = mustOpen(outName, "w");
 enum gfType qType = gfTypeFromName(qTypeName);