be4311c07e14feb728abc6425ee606ffaa611a58 markd Fri Jan 22 06:46:58 2021 -0800 merge with master diff --git src/hg/hgTracks/bigBedTrack.c src/hg/hgTracks/bigBedTrack.c index fcfcf31..798309c 100644 --- src/hg/hgTracks/bigBedTrack.c +++ src/hg/hgTracks/bigBedTrack.c @@ -521,30 +521,33 @@ int i = 0; for (field = fields; field != NULL; field = field->next) fieldNames[i++] = field->name; } } // a fake item that is the union of the items that span the current window struct linkedFeatures *spannedLf = NULL; unsigned filtered = 0; for (bb = bbList; bb != NULL; bb = bb->next) { struct linkedFeatures *lf = NULL; char *bedRow[bbi->fieldCount]; if (sameString(track->tdb->type, "bigPsl")) { + // fill out bedRow to support mouseOver pattern replacements + char startBuf[16], endBuf[16]; + bigBedIntervalToRow(bb, chromName, startBuf, endBuf, bedRow, ArraySize(bedRow)); char *seq, *cds; struct psl *psl = pslFromBigPsl(chromName, bb, seqTypeField, &seq, &cds); int sizeMul = pslIsProtein(psl) ? 3 : 1; boolean isXeno = 0; // just affects grayIx boolean nameGetsPos = FALSE; // we want the name to stay the name lf = lfFromPslx(psl, sizeMul, isXeno, nameGetsPos, track); lf->original = psl; if ((seq != NULL) && (lf->orientation == -1)) reverseComplement(seq, strlen(seq)); lf->extra = seq; lf->cds = cds; } else if (sameString(tdb->type, "bigDbSnp")) {