e9cd3eef710ba3141d58ef119006b7d2327e5b7f
markd
  Wed Dec 9 13:52:01 2020 -0800
fixed accidently backout of master changes in the last merge

diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra
index 18ca53f..1d9e9fb 100644
--- src/hg/makeDb/trackDb/human/trackDb.ra
+++ src/hg/makeDb/trackDb/human/trackDb.ra
@@ -3170,34 +3170,36 @@
 dataVersion miRBase Release 13.0 (March 2009) and snoRNABase Version 3
 
 track lrgBigPsl
 shortLabel LRG Transcripts (RM 24672)
 longLabel Locus Reference Genomic (LRG) Fixed Transcript Annotations (RedMine 24672)
 group genes
 visibility hide
 type bigPsl
 mouseOverField mouseOver
 skipFields mouseOver
 skipEmptyFields on
 urls ncbiTranscript=https://www.ncbi.nlm.nih.gov/nuccore/$$ ensemblTranscript=http://www.ensembl.org/Multi/Search/Results?site=ensembl_all;q=$$ ncbiProtein=https://www.ncbi.nlm.nih.gov/protein/$$ ensemblProtein=http://www.ensembl.org/Multi/Search/Results?site=ensembl_all;q=$$
 cdsTable lrgCds
 cdnaTable lrgCdna
 pepTable lrgPep
-baseColorDefault diffCodons
+altColor 127,127,127
+baseColorDefault genomicCodons
+baseColorUseSequence lfExtra
 baseColorUseCds table lrgCds
-baseColorUseSequence table lrgCdna
 indelDoubleInsert on
+indelPolyA on
 indelQueryInsert on
 showDiffBasesAllScales .
 showDiffBasesMaxZoom 10000.0
 showCdsAllScales .
 showCdsMaxZoom 10000.0
 color 54,125,29
 urlLabel Link to LRG transcript:
 url http://ftp.ebi.ac.uk/pub/databases/lrgex/$$.xml#transcripts_anchor
 
 track lrgTranscriptAli
 shortLabel LRG Transcripts
 longLabel Locus Reference Genomic (LRG) Fixed Transcript Annotations
 group genes
 visibility hide
 type psl .