3d71b2793b72fd0f6f4ff1511bb93cf3b6b76497
markd
  Sun Jan 3 14:01:54 2021 -0800
fixed parameter change errors in blatSuite

diff --git src/isPcr/gfPcr/gfPcr.c src/isPcr/gfPcr/gfPcr.c
index 4bce9ee..0801e1b 100644
--- src/isPcr/gfPcr/gfPcr.c
+++ src/isPcr/gfPcr/gfPcr.c
@@ -76,21 +76,23 @@
     outFile = argv[5];
     }
 else if (argc == 7) /* One primer pair */
     {
     AllocVar(inList);
     inList->name = clName;
     inList->fPrimer = cloneString(argv[4]);
     inList->rPrimer = cloneString(argv[5]);
     outFile = argv[6];
     }
 else
     usage();
 host = argv[1];
 port = argv[2];
 seqDir = argv[3];
-outList = gfPcrViaNet(host, port, seqDir, inList, maxSize, minPerfect, minGood);
+struct gfConnection *conn = gfConnect(host, port, NULL, NULL);
+outList = gfPcrViaNet(conn, seqDir, inList, maxSize, minPerfect, minGood);
+gfDisconnect(&conn);
 gfPcrOutputWriteAll(outList, clOut, NULL, outFile);
 gfPcrOutputFreeList(&outList);
 gfPcrInputFreeList(&inList);
 return 0;
 }