ef2b0974644900d17bdc4e0a2c8056e995832282
markd
  Thu Jan 16 11:14:03 2020 -0800
Revert "Initial pass at 64bit blat index"

This reverts commit 85f6ef8de85a89781978add2ed98fb158718cd40.

diff --git src/jkOwnLib/ooc.c src/jkOwnLib/ooc.c
index fd814bb..d2901a0 100644
--- src/jkOwnLib/ooc.c
+++ src/jkOwnLib/ooc.c
@@ -1,24 +1,24 @@
 /* ooc.c - Stuff to handle overused N-mers (tiles) in genome
  * indexing schemes. */
 /* Copyright 2001-2003 Jim Kent.  All rights reserved. */
 #include "common.h"
 #include "ooc.h"
 #include "sig.h"
 
 
-void oocMaskCounts(char *oocFile, bits64 *tileCounts, int tileSize, bits32 maxPat)
+void oocMaskCounts(char *oocFile, bits32 *tileCounts, int tileSize, bits32 maxPat)
 /* Set items of tileCounts to maxPat if they are in oocFile. 
  * Effectively masks this out of index.*/
 {
 if (oocFile != NULL)
     {
     bits32 sig, psz;
     FILE *f = mustOpen(oocFile, "rb");
     boolean mustSwap = FALSE;
 
     mustReadOne(f, sig);
     mustReadOne(f, psz);
     if (sig == oocSig)
 	mustSwap = FALSE;
     else if (sig == oocSigSwapped)
 	{
@@ -40,31 +40,31 @@
 	    v.bytes[2] = u.bytes[1];
 	    v.bytes[3] = u.bytes[0];
 	    tileCounts[v.whole] = maxPat;
 	    }
 	}
     else
 	{
 	bits32 oli;
 	while (readOne(f, oli))
 	    tileCounts[oli] = maxPat;
 	}
     fclose(f);
     }
 }
 
-void oocMaskSimpleRepeats(bits64 *tileCounts, int seedSize, bits32 maxPat)
+void oocMaskSimpleRepeats(bits32 *tileCounts, int seedSize, bits32 maxPat)
 /* Mask out simple repeats in index . */
 {
 int i, j, k;
 int tileMask = (1<<(seedSize+seedSize))-1;
 for (i=0; i<4; ++i)
     {
     for (j=0; j<4; ++j)
         {
         bits32 repeat = 0;
         for (k=0; k<8; ++k)
             {
             repeat <<= 2;
             repeat |= i;
             repeat <<= 2;
             repeat |= j;