06d7be056190c14b85e71bc12523f18ea6815b5e markd Mon Dec 7 00:50:29 2020 -0800 BLAT mmap index support merge with master diff --git src/utils/makefile src/utils/makefile index 1f803de..154847c 100644 --- src/utils/makefile +++ src/utils/makefile @@ -95,31 +95,30 @@ subChar \ subColumn \ tailLines \ textHistogram \ tickToDate \ timing \ toLower \ toUpper \ trackDbIndexBb \ twoBitDup \ twoBitInfo \ twoBitToFa \ wigCorrelate \ wigToBigWig \ wordLine \ - chromToUcsc # list of utilities to build of interest only at UCSC UCSC_APPS = \ addCols \ aNotB \ aveCols \ ccCp \ convolve \ detab \ dnsInfo \ faFlyBaseToUcsc \ faGapLocs \ faGapSizes \ faNcbiToUcsc \ @@ -133,45 +132,48 @@ gffPeek \ git-reports \ htmlPics \ jkUniq \ lineCount \ nt4Frag \ pslToXa \ scaffoldFaToAgp \ scrambleFa \ subs \ tableSum \ textHist2 \ udcCleanup \ undupFa \ upper \ + vcfFilter \ venn \ verticalSplitSqlTable \ weedLines # list of scripts to install USER_APP_SCRIPTS = \ bedJoinTabOffset.py \ expMatrixToBarchartBed \ barChartMaxLimit \ ucscApiClient \ tdbRename \ tdbSort \ webSync \ + chromToUcsc \ + bigHeat SCRIPT_FILES = \ agpToLift \ apacheLogParse \ bedCollapse.pl \ bedFixBlockOverlaps \ bedOverlapMerge \ bedSingleCover.pl \ bedBetween \ doLocusName \ extToolsChromeParse \ iSync \ lodToBedScore \ matrixMerge \ mkMafFrames.pl \