06d7be056190c14b85e71bc12523f18ea6815b5e markd Mon Dec 7 00:50:29 2020 -0800 BLAT mmap index support merge with master diff --git src/hg/makeDb/doc/hg38/covidMuts.txt src/hg/makeDb/doc/hg38/covidMuts.txt new file mode 100644 index 0000000..f050d60 --- /dev/null +++ src/hg/makeDb/doc/hg38/covidMuts.txt @@ -0,0 +1,4 @@ +# just a lift from the hg19 data +cd /hive/data/genomes/hg38/bed/covidMuts/ +liftOver -bedPlus=12 ../../hg19/bed/covidMuts/covidMuts.bed /gbdb/hg19/liftOver/hg19ToHg38.over.chain.gz covidMuts.bed unmapped.bed -tab +bedToBigBed -tab covidMuts.bed ../chrom.sizes covidMuts.bb -as=../../hg19/bed/covidMuts/covidMuts.as -type=bed12+