dc6ddf665daba39f0d4aac9c83e2d0764da8cf3b
markd
  Fri Mar 12 20:48:48 2021 -0800
import of gencodeV37lift37

diff --git src/hg/makeDb/schema/all.joiner src/hg/makeDb/schema/all.joiner
index b8ed55e..17a2694 100644
--- src/hg/makeDb/schema/all.joiner
+++ src/hg/makeDb/schema/all.joiner
@@ -4171,30 +4171,121 @@
     hg19.wgEncodeGencodeUniProtV36lift37.transcriptId dupeOk
     hg19.wgEncodeGencodeAttrsV36lift37.transcriptId minCheck=0.35
 
 identifier wgEncodeGencodeAnnotationRemarkV36lift37
 "Link together Gencode Annotation Remark table with Attributes table"
     hg19.wgEncodeGencodeAnnotationRemarkV36lift37.transcriptId dupeOk
     hg19.wgEncodeGencodeAttrsV36lift37.transcriptId minCheck=0.10
 
 identifier wgEncodeGencodeEntrezGeneV36lift37
 "Link together Gencode UniProt Support table with Attributes table"
     hg19.wgEncodeGencodeEntrezGeneV36lift37.transcriptId dupeOk
     hg19.wgEncodeGencodeEntrezGeneV36lift37.transcriptId minCheck=0.35
 
 # end Gencode V36lift37
 
+# begin Gencode V37lift37
+
+# gencode genePred tables with no associations
+# wgEncodeGencodePolyaV37lift37
+# wgEncodeGencode2wayConsPseudoV37lift37
+
+# gencode genePred tables with joining through wgEncodeGencodeAttrsV37lift37
+identifier wgEncodeGencodeBasicAttrsV37lift37
+"Link together Gencode Basic Table with Attributes table"
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId
+    hg19.wgEncodeGencodeBasicV37lift37.name
+
+identifier wgEncodeGencodeCompAttrsV37lift37
+"Link together Gencode Comprehensive Table with Attributes table"
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId
+    hg19.wgEncodeGencodeCompV37lift37.name
+
+identifier wgEncodeGencodePseudoGeneAttrsV37lift37
+"Link together Gencode PseudoGene Table with Attributes table"
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId
+    hg19.wgEncodeGencodePseudoGeneV37lift37.name
+
+# gencode association tables (joined through wgEncodeGencodeAttrsV37lift37)
+identifier wgEncodeGencodeGeneSourceV37lift37
+"Link together Gencode Gene Source table with Attributes table"
+    hg19.wgEncodeGencodeGeneSourceV37lift37.geneId
+    hg19.wgEncodeGencodeAttrsV37lift37.geneId
+
+identifier wgEncodeGencodeGeneSymbolV37lift37
+"Link together Gencode gene symbol table with Attributes table"
+    hg19.wgEncodeGencodeGeneSymbolV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.20
+
+identifier wgEncodeGencodePdbV37lift37
+"Link together Gencode Pdb table with Attributes table"
+    hg19.wgEncodeGencodePdbV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.015
+
+identifier wgEncodeGencodePubMedV37lift37
+"Link together Gencode Pubmed table with Attributes table"
+    hg19.wgEncodeGencodePubMedV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId  minCheck=0.63
+
+identifier wgEncodeGencodeRefSeqV37lift37
+"Link together Gencode RefSeq table with Attributes table"
+    hg19.wgEncodeGencodeRefSeqV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.05
+
+identifier wgEncodeGencodeRefSeqToRefGeneV37lift37
+"Link together Gencode RefSeq table with refGene track"
+    hg19.wgEncodeGencodeRefSeqV37lift37.rnaAcc dupeOk chopAfter=.
+    hg19.refGene.name minCheck=0.77
+
+identifier wgEncodeGencodeTagV37lift37
+"Link together Gencode Tag table with Attributes table"
+    hg19.wgEncodeGencodeTagV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.36
+    hg19.wgEncodeGencodeRefSeqV37lift37.transcriptId minCheck=0.9
+
+identifier wgEncodeGencodeTranscriptSourceV37lift37
+"Link together Gencode Transcript Source table with Attributes table"
+    hg19.wgEncodeGencodeTranscriptSourceV37lift37.transcriptId
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId
+
+identifier wgEncodeGencodeTranscriptSupportV37lift37
+"Link together Gencode Transcript Support table with Attributes table"
+    hg19.wgEncodeGencodeTranscriptSupportV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.08
+
+identifier wgEncodeGencodeTranscriptionSupportLevelV37lift37
+"Link together Gencode Transcription Support Level table with Attributes table"
+    hg19.wgEncodeGencodeTranscriptionSupportLevelV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.30
+
+identifier wgEncodeGencodeUniProtV37lift37
+"Link together Gencode UniProt Support table with Attributes table"
+    hg19.wgEncodeGencodeUniProtV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.35
+
+identifier wgEncodeGencodeAnnotationRemarkV37lift37
+"Link together Gencode Annotation Remark table with Attributes table"
+    hg19.wgEncodeGencodeAnnotationRemarkV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeAttrsV37lift37.transcriptId minCheck=0.10
+
+identifier wgEncodeGencodeEntrezGeneV37lift37
+"Link together Gencode UniProt Support table with Attributes table"
+    hg19.wgEncodeGencodeEntrezGeneV37lift37.transcriptId dupeOk
+    hg19.wgEncodeGencodeEntrezGeneV37lift37.transcriptId minCheck=0.35
+
+# end Gencode V37lift37
+
 
 
 # begin Gencode VM2
 
 # gencode genepreds with no associations
 # wgEncodeGencodePolyaVM2
 # wgEncodeGencode2wayConsPseudoVM2
 
 # gencode genepreds with joining through wgEncodeGencodeAttrsVM2
 identifier wgEncodeGencodeBasicAttrsVM2
 "Link together Gencode Basic Table with Attributes table"
     mm10.wgEncodeGencodeAttrsVM2.transcriptId
     mm10.wgEncodeGencodeBasicVM2.name
 
 identifier wgEncodeGencodeCompAttrsVM2