bef062c8d38d8813621688d6cb115d9f9f9e0b3d
hiram
  Tue Apr 6 13:58:19 2021 -0700
correctly send gtf file to bigZips/genes refs #26428

diff --git src/hg/utils/automation/doNcbiRefSeq.pl src/hg/utils/automation/doNcbiRefSeq.pl
index 79521b5..1cbc3d0 100755
--- src/hg/utils/automation/doNcbiRefSeq.pl
+++ src/hg/utils/automation/doNcbiRefSeq.pl
@@ -859,30 +859,31 @@
     ln -s `pwd`/ncbiRefSeqGenomicDiff.bb $gbdbDir/ncbiRefSeqGenomicDiff.bb
   else
     rm -f ncbiRefSeqGenomicDiff.bed
   fi
 fi
 
 if [ -d "/usr/local/apache/htdocs-hgdownload/goldenPath/archive" ]; then
  gtfFile=`ls \$db.*.ncbiRefSeq.gtf.gz`
  mkdir -p /usr/local/apache/htdocs-hgdownload/goldenPath/archive/\$db/ncbiRefSeq
  rm -f /usr/local/apache/htdocs-hgdownload/goldenPath/archive/\$db/ncbiRefSeq/\$gtfFile
  ln -s `pwd`/\$db.*.ncbiRefSeq.gtf.gz \\
    /usr/local/apache/htdocs-hgdownload/goldenPath/archive/\$db/ncbiRefSeq/
 fi
 
 rm -f /usr/local/apache/htdocs-hgdownload/goldenPath/\$db/bigZips/genes/\$db.ncbiRefSeq.gtf.gz
+mkdir -p /usr/local/apache/htdocs-hgdownload/goldenPath/\$db/bigZips/genes
 ln -s `pwd`/\$db.*.ncbiRefSeq.gtf.gz \\
     /usr/local/apache/htdocs-hgdownload/goldenPath/\$db/bigZips/genes/\$db.ncbiRefSeq.gtf.gz
 
 featureBits \$db ncbiRefSeq > fb.ncbiRefSeq.\$db.txt 2>&1
 cat fb.ncbiRefSeq.\$db.txt 2>&1
 _EOF_
     );
   }	#	if ($dbExists)
   $bossScript->execute();
 } # doLoad
 
 #########################################################################
 # * step: cleanup [fileServer]
 sub doCleanup {
   my $runDir = "$buildDir";