7adb1d36b6e6f5ce11d882f348af4b1194ad17b6
max
  Wed Apr 7 01:05:10 2021 -0700
comitting a few changes to the uniprot pipeline to make it more stable for ottomatization, but also to get the filters to work correctly, refs #27069

diff --git src/hg/utils/otto/uniprot/doUpdate.sh src/hg/utils/otto/uniprot/doUpdate.sh
new file mode 100755
index 0000000..f9534bb
--- /dev/null
+++ src/hg/utils/otto/uniprot/doUpdate.sh
@@ -0,0 +1,11 @@
+#!/bin/sh
+# configuration setup for the doUniprot script
+cd /hive/data/outside/otto/uniprot
+#echo WARNING: NOT DOWNLOADING
+#./doUniprot run --skipDownload
+./doUniprot run  2> lastRun.log
+if [ $? == "0" ] ; then
+    echo Big Uniprot update OK.
+else
+    echo Big Uniprot update failed. Look at /hive/data/outside/otto/uniprot/lastRun.log and restart manually.
+fi