dd8d2773375a1e31bce66cb1bbc82ae44ef86bf8
braney
  Mon Mar 22 16:17:19 2021 -0700
change wiggleWindow trackDb variable to maxWindowCoverage.  Added doc.  #27079

diff --git src/hg/makeDb/trackDb/human/caddAlpha.ra src/hg/makeDb/trackDb/human/caddAlpha.ra
index 02b38dc..eb8e624 100644
--- src/hg/makeDb/trackDb/human/caddAlpha.ra
+++ src/hg/makeDb/trackDb/human/caddAlpha.ra
@@ -1,93 +1,93 @@
 track caddSuper
 shortLabel CADD
 longLabel CADD 1.6 Score for all single-basepair mutations and selected insertions/deletions
 superTrack on hide
 type bed
 visibility hide
 group phenDis
 color 100,130,160
 
 track cadd
 shortLabel CADD
 longLabel CADD 1.6 Score for all possible single-basepair mutations (zoom in to show exact score on mouse over, same basepair = score 0.0)
 type bigWig
 compositeTrack on
 parent caddSuper
 visibility dense
 #maxWindowToQuery 500000
 group phenDis
 color 100,130,160
 html caddSuper
 maxWindowToDraw 10000000
 
         track caddA
         shortLabel Mutation: A
         longLabel CADD 1.6 Score: Mutation is A
         type bigWig
         parent cadd on
         visibility dense
         bigDataUrl /gbdb/$D/cadd/a.bw
         maxHeightPixels 128:20:8
         viewLimits 0:30
         viewLimitsMax 0:100
 
         track caddC
         shortLabel Mutation: C
         longLabel CADD 1.6 Score: Mutation is C
         type bigWig
         parent cadd on
         visibility dense
         bigDataUrl /gbdb/$D/cadd/c.bw
         maxHeightPixels 128:20:8
         viewLimits 0:30
         viewLimitsMax 0:100
 
         track caddG
         shortLabel Mutation: G
         longLabel CADD 1.6 Score: Mutation is G
         type bigWig
         parent cadd on
         visibility dense
         bigDataUrl /gbdb/$D/cadd/g.bw
         maxHeightPixels 128:20:8
         viewLimits 0:30
         viewLimitsMax 0:100
 
         track caddT
         shortLabel Mutation: T
         longLabel CADD 1.6 Score: Mutation is T
         type bigWig
         parent cadd on
         visibility dense
         bigDataUrl /gbdb/$D/cadd/t.bw
         maxHeightPixels 128:20:8
         viewLimits 0:30
         viewLimitsMax 0:100
 
 track caddIns
 shortLabel Insertions
 longLabel CADD 1.6 Score: Insertions - label is length of insertion
 type bigBed 9 +
 parent caddSuper
 visibility dense
 bigDataUrl /gbdb/$D/cadd/ins.bb
 mouseOver Mutation: $change CADD Phred score: $phred
 html caddSuper
-wiggleWindow 40000
+maxWindowCoverage 40000
 maxItems 1000000
 maxWindowToDraw 9000000
 scoreFilterLimits 0:100
 
 track caddDel
 shortLabel Deletions
 longLabel CADD 1.6 Score: Deletions - label is length of deletion
 type bigBed 9 +
 parent caddSuper
 visibility dense
 bigDataUrl /gbdb/$D/cadd/del.bb
 mouseOver Mutation: $change CADD Phred score: $phred
 html caddSuper
-wiggleWindow 40000
+maxWindowCoverage 40000
 maxItems 1000000
 maxWindowToDraw 9000000
 scoreFilterLimits 0:100