dd8d2773375a1e31bce66cb1bbc82ae44ef86bf8 braney Mon Mar 22 16:17:19 2021 -0700 change wiggleWindow trackDb variable to maxWindowCoverage. Added doc. #27079 diff --git src/hg/makeDb/trackDb/human/caddAlpha.ra src/hg/makeDb/trackDb/human/caddAlpha.ra index 02b38dc..eb8e624 100644 --- src/hg/makeDb/trackDb/human/caddAlpha.ra +++ src/hg/makeDb/trackDb/human/caddAlpha.ra @@ -1,93 +1,93 @@ track caddSuper shortLabel CADD longLabel CADD 1.6 Score for all single-basepair mutations and selected insertions/deletions superTrack on hide type bed visibility hide group phenDis color 100,130,160 track cadd shortLabel CADD longLabel CADD 1.6 Score for all possible single-basepair mutations (zoom in to show exact score on mouse over, same basepair = score 0.0) type bigWig compositeTrack on parent caddSuper visibility dense #maxWindowToQuery 500000 group phenDis color 100,130,160 html caddSuper maxWindowToDraw 10000000 track caddA shortLabel Mutation: A longLabel CADD 1.6 Score: Mutation is A type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/a.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddC shortLabel Mutation: C longLabel CADD 1.6 Score: Mutation is C type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/c.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddG shortLabel Mutation: G longLabel CADD 1.6 Score: Mutation is G type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/g.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddT shortLabel Mutation: T longLabel CADD 1.6 Score: Mutation is T type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/t.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddIns shortLabel Insertions longLabel CADD 1.6 Score: Insertions - label is length of insertion type bigBed 9 + parent caddSuper visibility dense bigDataUrl /gbdb/$D/cadd/ins.bb mouseOver Mutation: $change CADD Phred score: $phred html caddSuper -wiggleWindow 40000 +maxWindowCoverage 40000 maxItems 1000000 maxWindowToDraw 9000000 scoreFilterLimits 0:100 track caddDel shortLabel Deletions longLabel CADD 1.6 Score: Deletions - label is length of deletion type bigBed 9 + parent caddSuper visibility dense bigDataUrl /gbdb/$D/cadd/del.bb mouseOver Mutation: $change CADD Phred score: $phred html caddSuper -wiggleWindow 40000 +maxWindowCoverage 40000 maxItems 1000000 maxWindowToDraw 9000000 scoreFilterLimits 0:100