dc9c1c9f0f71751a02d7427ccae08e013fa7c224 lrnassar Thu Mar 25 16:38:09 2021 -0700 Fixing fat finger mistake in link, no RM. diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index a88eca3..dfd7e8a 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -48,31 +48,31 @@ </div> </div> </div> <!-- ============= 2021 archived news ============= --> <a name="2021"></a> <a name="032321"></a> <h2>Mar. 23, 2020 New GENCODE gene tracks: Human V37 (hg19/hg38) - Mouse M26 (mm39)</h2> <p> We are pleased to announce new GENCODE Gene annotation tracks, which correspond to <a href="https://www.ensembl.info/2021/02/15/ensembl-103-has-been-released/" target="_blank">Ensembl 103</a>, for three assemblies: <a target="_blank" href="../../cgi-bin/hgTrackUi?db=hg19&c=chr21&g=wgEncodeGencodeV37lift37">hg19/GRCh37</a>, -<a target="_blank" href="../../cgi-bin/hgTrackUi?db=hg38c=chr1&g=wgEncodeGencodeV37">hg38/GRCh38</a>, +<a target="_blank" href="../../cgi-bin/hgTrackUi?db=hg38&c=chr1&g=wgEncodeGencodeV37">hg38/GRCh38</a>, and <a target="_blank" href="../../cgi-bin/hgTrackUi?db=mm39&c=chr12&g=wgEncodeGencodeVM26">mm39/GRCm39</a>. For human, the GENCODE V37 annotations were mapped to hg38/GRCh38 and then back-mapped to the hg19/GRCh37 assembly. For all three assemblies, the gene sets contain the following tracks:</p> <ul> <li>Basic - a subset of the <em>Comprehensive set</em>.</li> <li>Comprehensive - all GENCODE coding and non-coding transcript annotations, including polymorphic pseudogenes. This includes both manual and automatic annotations.</li> <li>Pseudogenes - all annotations except polymorphic pseudogenes.</li></ul> <p> The hg38 and mm39 assemblies also include the following tracks that are not available on hg19: </p> <ul> <li>2-way Pseudogenes - pseudogenes predicted by both the Yale Pseudopipe and UCSC Retrofinder pipelines.</li>