28871e917991c9218ea9ffe5a2b85a66838560b7 braney Fri Apr 2 18:37:43 2021 -0700 turn freetype fonts on in GBiC diff --git src/product/installer/browserSetup.sh src/product/installer/browserSetup.sh index 3a71188..e3c8362 100755 --- src/product/installer/browserSetup.sh +++ src/product/installer/browserSetup.sh @@ -324,30 +324,33 @@ # These settings enable geographic allele frequency images on the # details pages for the HGDP Allele Frequency (hgdpGeo) track. # (HGDP = Human Genome Diversity Project) # Programs required for per-SNP geographic maps of HGDP population # allele frequencies: hgc.psxyPath=/usr/lib/gmt/bin/psxy hgc.ps2rasterPath=/usr/lib/gmt/bin/ps2raster hgc.ghostscriptPath=/usr/bin/ghostscript # legacy setting browser.indelOptions=on # sql debugging: uncomment to see all SQL commands in the apache log #JKSQL_TRACE=on #JKSQL_PROF=on +freeType=on +freeTypeDir=../htdocs/urw-fonts + EOF_HGCONF read -r -d '' HELP_STR << EOF_HELP $0 [options] [command] [assemblyList] - UCSC genome browser install script command is one of: install - install the genome browser on this machine. This is usually required before any other commands are run. minimal - download only a minimal set of tables. Missing tables are downloaded on-the-fly from UCSC. mirror - download a full assembly (also see the -t option below). After completion, no data is downloaded on-the-fly from UCSC. update - update the genome browser software and data, updates all tables of an assembly, like "mirror" cgiUpdate - update only the genome browser software, not the data. Not