9e1d18bbaeabc8922c4aba1baa71102a436d1cc2
hiram
  Tue Apr 27 14:12:08 2021 -0700
hive cleaning running cleanup step for crispr tracks no redmine

diff --git src/hg/makeDb/doc/cotJap2/initialBuild.txt src/hg/makeDb/doc/cotJap2/initialBuild.txt
index 2789da4..30995b1 100644
--- src/hg/makeDb/doc/cotJap2/initialBuild.txt
+++ src/hg/makeDb/doc/cotJap2/initialBuild.txt
@@ -947,34 +947,35 @@
    -stop=load -buildDir=`pwd` -smallClusterHub=hgwdev-101 cotJap2 ncbiRefSeq) \
 	> do.log 2>&1
     # real    39m23.083s
 
     # script under development, failed when it reached specScores, fixing
     # and continuing:
 
     time (~/kent/src/hg/utils/automation/doCrispr.pl -continue=specScores \
    -stop=load -buildDir=`pwd` -smallClusterHub=hgwdev-101 cotJap2 ncbiRefSeq) \
 	> specScores.log 2>&1
     # real    870m26.370s
 
     # add to cotJap2/trackDb.ra:
     # include ../../crispr10K.ra
 
-    # after is appears to be correct, cleanup:
-    time (~/kent/src/hg/utils/automation/doCrispr.pl -continue=cleanup \
-   -buildDir=`pwd` -smallClusterHub=hgwdev-101 cotJap2 ncbiRefSeq) \
-	> do.log 2>&1
+    # after is appears to be correct, cleanup: 2021-04-26
+    time (~/kent/src/hg/utils/automation/doCrispr.pl -verbose=2 \
+       -continue=cleanup cotJap2 -fileServer=hgwdev \
+    -buildDir=`pwd` -smallClusterHub=hgwdev -bigClusterHub=ku \
+      -workhorse=hgwdev) > cleanup.log 2>&1
 
 ##############################################################################
 # all.joiner update, downloads and in pushQ - (DONE - 2018-11-26 - Hiram)
 xyz
     cd $HOME/kent/src/hg/makeDb/schema
     # verify all the business is done for release
     ~/kent/src/hg/utils/automation/verifyBrowser.pl cotJap2
 # 70 tables in database cotJap2 - Japanese quail, Coturnix japonica
 # verified 59 tables in database cotJap2, 11 extra tables, 21 optional tables
 # NCBI RefSeq genes     10 optional tables
 # chainNetRBestMm10     3 optional tables
 # chainNetSynHg38       3 optional tables
 # chainNetSynMm10       3 optional tables
 # gapOverlap    1 optional tables
 # tandemDups    1 optional tables