9e1d18bbaeabc8922c4aba1baa71102a436d1cc2 hiram Tue Apr 27 14:12:08 2021 -0700 hive cleaning running cleanup step for crispr tracks no redmine diff --git src/hg/makeDb/doc/enhLutNer1/initialBuild.txt src/hg/makeDb/doc/enhLutNer1/initialBuild.txt index ce9d39b..de601a0 100644 --- src/hg/makeDb/doc/enhLutNer1/initialBuild.txt +++ src/hg/makeDb/doc/enhLutNer1/initialBuild.txt @@ -785,30 +785,36 @@ # Submission to last job: 160229s 2670.48m 44.51h 1.85d cd specScores time find tmp/outGuides -type f | xargs cut -f3-6 > ../specScores.tab # real 355m56.098s cd .. wc -l specScores.tab # 115041122 specScores.tab time (~/kent/src/hg/utils/automation/doCrispr.pl \ -continue=effScores -stop=load \ -buildDir=`pwd` -smallClusterHub=ku enhLutNer1 ncbiRefSeq) \ > load.log # real 393m15.373s + # hive cleaning 2021-04-26 - Hiram - 10.86 Tb + time (~/kent/src/hg/utils/automation/doCrispr.pl -verbose=2 \ + -continue=cleanup enhLutNer1 -fileServer=hgwdev \ + -buildDir=`pwd` -smallClusterHub=hgwdev -bigClusterHub=ku \ + -workhorse=hgwdev) > cleanup.log 2>&1 + ######################################################################### # all.joiner update, downloads and in pushQ - (TBD - 2019-07-03,08-30 - Jonathan) xyz cd $HOME/kent/src/hg/makeDb/schema # verify all the business is done for release ~/kent/src/hg/utils/automation/verifyBrowser.pl enhLutNer1 # fixup all.joiner until this is a clean output joinerCheck -database=enhLutNer1 -tableCoverage all.joiner joinerCheck -database=enhLutNer1 -times all.joiner joinerCheck -database=enhLutNer1 -keys all.joiner # when clean, check in: git commit -m 'adding rules for enhLutNer1, refs #21152' all.joiner git push