2e3edf11e977a5c3a12aa2e1fed9cbfa25ffe928
hiram
  Mon Apr 26 15:02:21 2021 -0700
cleaning up crisprAll working data about 326 Tb no redmine

diff --git src/hg/makeDb/doc/panPan3/initialBuild.txt src/hg/makeDb/doc/panPan3/initialBuild.txt
index 4c3540e..52840d4 100644
--- src/hg/makeDb/doc/panPan3/initialBuild.txt
+++ src/hg/makeDb/doc/panPan3/initialBuild.txt
@@ -974,30 +974,37 @@
 # Completed: 28661 of 28661 jobs
 # CPU time in finished jobs:   13143908s  219065.14m  3651.09h  152.13d  0.417 y
 # IO & Wait Time:                 68503s    1141.71m    19.03h    0.79d  0.002 y
 # Average job time:                 461s       7.68m     0.13h    0.01d
 # Longest finished job:           10393s     173.22m     2.89h    0.12d
 # Submission to last job:         54285s     904.75m    15.08h    0.63d
 
     cat offTargets/run.time | sed -e 's/^/# /;'
 # Completed: 155244 of 155244 jobs
 # CPU time in finished jobs:    2205628s   36760.46m   612.67h   25.53d  0.070 y
 # IO & Wait Time:                825117s   13751.95m   229.20h    9.55d  0.026 y
 # Average job time:                  20s       0.33m     0.01h    0.00d
 # Longest finished job:             157s       2.62m     0.04h    0.00d
 # Submission to last job:          5940s      99.00m     1.65h    0.07d
 
+    # cleaning 2021-04-24 - Hiram
+    time (~/kent/src/hg/utils/automation/doCrispr.pl -verbose=2 \
+       -continue=cleanup panPan3 -tableName=crisprAll -fileServer=hgwdev \
+    -buildDir=`pwd` -smallClusterHub=hgwdev -bigClusterHub=ku \
+      -workhorse=hgwdev) > cleanup.log 2>&1
+    # real    473m37.404s
+
 #########################################################################
 # all.joiner update, downloads and in pushQ - (WORKING - 2020-06-15 - Hiram)
     cd $HOME/kent/src/hg/makeDb/schema
     # verify all the business is done for release
     ~/kent/src/hg/utils/automation/verifyBrowser.pl panPan3
 # 64 tables in database panPan3 - Bonobo, Pan paniscus
 # verified 62 tables in database panPan3, 2 extra tables, 24 optional tables
 # NCBI RefSeq genes     10 optional tables
 # chainNetRBestHg38     3 optional tables
 # chainNetRBestMm10     3 optional tables
 # chainNetSynHg38       3 optional tables
 # chainNetSynMm10       3 optional tables
 # gapOverlap    1 optional tables
 # tandemDups    1 optional tables
 # 1     crisprAllRanges - extra table