05f7054ad0056072231e8bb4891287c54ed629e3
chmalee
  Tue Apr 13 11:10:01 2021 -0700
Fixing the gnomad structural variants deletion and duplication colors which were swapped both in the bigBed and the track description, refs #27363

diff --git src/hg/makeDb/gnomad/gnomadSvToUcsc.awk src/hg/makeDb/gnomad/gnomadSvToUcsc.awk
index 2b6bf0a..6ab6a72 100755
--- src/hg/makeDb/gnomad/gnomadSvToUcsc.awk
+++ src/hg/makeDb/gnomad/gnomadSvToUcsc.awk
@@ -79,34 +79,34 @@
 name=a[3] "_" a[4] "_" a[5]
 mouseOver = "Gene(s) affected: " geneListStr ", Position: " chrom ":" start+1 "-" end ", Size: " svlen ", Class: " svtype ", Allele Count: " ac ", Allele Number: " an ", Allele Frequency: " af
 
 color=""
 switch(svtype) {
     case "BND":
         color = "128,128,128"
         break
     case "CPX":
         color = "0,179,179"
         break
     case "CTX":
         color = "0,179,179"
         break
     case "DEL":
-        color = "0,0,255"
+        color = "255,0,0"
         break
     case "DUP":
-        color = "255,0,0"
+        color = "0,0,255"
         break
     case "INS":
         color = "255,165,0"
         break
     case "INV":
         color = "192,0,192"
         break
     case "MCNV":
         color = "0,179,179"
         break
     default:
         color = "154,182,160"
         break
 }