7d0d819ed29f8a0501c3e8e99930b83ccdbf65e4 hiram Mon Apr 12 14:01:50 2021 -0700 genark table definition to relate GC accession to hub url refs #27285 diff --git src/hg/lib/genark.sql src/hg/lib/genark.sql new file mode 100644 index 0000000..17503cc --- /dev/null +++ src/hg/lib/genark.sql @@ -0,0 +1,16 @@ +# genark.sql was originally generated by the autoSql program, which also +# generated genark.c and genark.h. This creates the database representation of +# an object which can be loaded and saved from RAM in a fairly +# automatic way. + +#index to UCSC assembly hubs +CREATE TABLE genark ( + gcAccession varchar(255) not null, # GC[AF] accssion identifier, e.g.: GCF_000001405.39 + hubUrl varchar(255) not null, # path name to hub.txt: GCF/000/001/405/GCF_000001405.39/hub.txt + asmName varchar(255) not null, # assembly name: GRCh38.p13 + scientificName varchar(255) not null, # scientific name: Homo sapiens + commonName varchar(255) not null, # common name: human + taxId int not null, # taxon id: 9606 + #Indices + PRIMARY KEY(gcAccession) +);