File Changes for angie
switch to commits view, user indexv414_preview to v414_preview2 (2021-04-19 to 2021-04-26) v414
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- src/hg/hgTracks/cds.c
- lines changed 15, context: html, text, full: html, text
a35c9adcf9ff3f456c3c6255e3e3fd47d1403f00 Wed Apr 21 20:13:40 2021 -0700
Check for bigPsl inside getPslCds, so all callers don't have to check first. refs #27312 (Jairo reported bug in note 24)
- src/hg/utils/otto/sarscov2phylo/gisaidFromChunks.sh
- lines changed 2, context: html, text, full: html, text
d6677c2b706a2424e70bcacd517d8a61f4b39f20 Wed Apr 21 15:09:20 2021 -0700
Apparently GISAID sequence names can have apostrophes too. Strip out more troublemaking characters.
- src/hg/utils/otto/sarscov2phylo/updatePublicTree.sh
- lines changed 8, context: html, text, full: html, text
6aa3eabbd7f14c3f3260183f0cbbf54e2c176724 Mon Apr 19 15:41:28 2021 -0700
Oops, fix some paths & typos for gzipping public tree archive files.
- src/utils/faRenameRecords/faRenameRecords.c
- lines changed 8, context: html, text, full: html, text
e507dd065fc544d3d6d6122b72aaaf45693d856f Wed Apr 21 16:39:02 2021 -0700
Added -pass option to faRenameRecords so that if sequences are not in the oldToNew file, they are passed through (no errAbort).
- src/utils/makefile
- lines changed 1, context: html, text, full: html, text
c09a391e996f239d60171eddbf139b270c8ceba5 Wed Apr 21 16:39:29 2021 -0700
Adding faRenameRecords to top-level build.
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