02336754147822f5aa61ba13277123b2cc629001 markd Thu May 20 08:38:55 2021 -0700 Moved pslMap, pslMapPostChain, pslRc, pslSwap to src/utils, as they do not have hg/lib dependencies. diff --git src/utils/pslMap/tests/expected/negQChain.psl src/utils/pslMap/tests/expected/negQChain.psl new file mode 100644 index 0000000..0582da5 --- /dev/null +++ src/utils/pslMap/tests/expected/negQChain.psl @@ -0,0 +1 @@ +4196 0 0 0 3 26 33 58059 - NM_001001144.1-1 4247 0 4222 chr3 199501827 47430198 47492453 37 1,18,32,15,20,17,20,255,207,81,167,83,86,247,63,204,116,202,189,377,219,99,95,113,127,173,106,221,158,130,130,89,11,10,14,85,16, 25,26,44,76,91,111,128,160,415,622,703,870,953,1039,1286,1349,1553,1669,1871,2060,2437,2656,2755,2850,2963,3090,3263,3369,3590,3748,3878,4008,4097,4110,4120,4134,4231, 47430198,47430205,47430226,47430262,47430278,47430300,47430318,47430338,47430673,47431065,47431320,47431591,47433615,47433797,47434047,47434113,47434627,47434814,47435148,47435821,47437047,47437424,47438935,47440426,47441978,47442490,47443650,47443940,47445006,47451501,47459365,47459496,47492292,47492303,47492328,47492352,47492437,