02336754147822f5aa61ba13277123b2cc629001
markd
  Thu May 20 08:38:55 2021 -0700
Moved pslMap, pslMapPostChain, pslRc, pslSwap to src/utils, as they do not have hg/lib dependencies.

diff --git src/utils/pslMap/tests/input/gencode.src.psl src/utils/pslMap/tests/input/gencode.src.psl
new file mode 100644
index 0000000..d624626
--- /dev/null
+++ src/utils/pslMap/tests/input/gencode.src.psl
@@ -0,0 +1,5 @@
+1424	0	0	0	0	0	9	225363	+	ENSMUST00000145003.1	1424	0	1424	12	120129022	57230445	57457232	10	166,207,127,106,130,34,171,108,95,280,	0,166,373,500,606,736,770,941,1049,1144,	57230445,57303344,57306010,57307358,57325523,57331995,57332288,57364126,57414315,57456952,
+2117	0	0	0	0	0	10	264637	+	ENSMUST00000123498.1	2117	0	2117	12	120129022	57230445	57497199	11	166,207,127,106,130,34,171,108,95,231,742,	0,166,373,500,606,736,770,941,1049,1144,1375,	57230445,57303344,57306010,57307358,57325523,57331995,57332288,57364126,57414315,57456952,57496457,
+2158	0	0	0	0	0	12	182711	+	ENSMUST00000153137.1	2158	0	2158	12	120129022	57282172	57467041	13	138,82,207,127,106,130,34,171,108,95,231,143,586,	0,138,220,427,554,660,790,824,995,1103,1198,1429,1572,	57282172,57282873,57303344,57306010,57307358,57325523,57331995,57332288,57364126,57414315,57456952,57460841,57466455,
+2171	0	0	0	0	0	11	212856	+	ENSMUST00000130447.1	2171	0	2171	12	120129022	57282172	57497199	12	138,82,207,127,106,130,34,171,108,95,231,742,	0,138,220,427,554,660,790,824,995,1103,1198,1429,	57282172,57282873,57303344,57306010,57307358,57325523,57331995,57332288,57364126,57414315,57456952,57496457,
+283	0	0	0	0	0	2	33882	+	ENSMUST00000128945.1	283	0	283	12	120129022	57332428	57366593	3	31,108,144,	0,31,139,	57332428,57364126,57366449,