02336754147822f5aa61ba13277123b2cc629001
markd
  Thu May 20 08:38:55 2021 -0700
Moved pslMap, pslMapPostChain, pslRc, pslSwap to src/utils, as they do not have hg/lib dependencies.

diff --git src/utils/pslMap/tests/input/mrnaRefSeqX.psl src/utils/pslMap/tests/input/mrnaRefSeqX.psl
new file mode 100644
index 0000000..c091e2a
--- /dev/null
+++ src/utils/pslMap/tests/input/mrnaRefSeqX.psl
@@ -0,0 +1,17 @@
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+95	18	0	0	2	84	2	91	++	AK000004	4670	2417	2614	NM_033086	4952	2653	2857	4	24,40,25,24,	2417,2514,2554,2590,	2653,2677,2765,2833,
+76	11	0	0	0	0	2	85	++	AK000004	4670	2394	2481	NM_033086	4952	2699	2871	3	33,20,34,	2394,2427,2447,	2699,2805,2837,
+76	18	0	0	1	37	1	126	++	AK000004	4670	2517	2648	NM_033086	4952	2657	2877	3	27,25,42,	2517,2581,2606,	2657,2684,2835,
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+4952	0	0	0	0	0	0	0	++	AY211386	4952	0	4952	NM_033086	4952	0	4952	1	4952,	0,	0,
+99	11	0	0	0	0	2	85	++	AY211386	4952	2653	2763	NM_033086	4952	2676	2871	3	56,20,34,	2653,2709,2729,	2676,2805,2837,
+129	22	0	0	3	69	2	53	++	AY211386	4952	2676	2896	NM_033086	4952	2653	2857	5	69,3,26,29,24,	2676,2745,2768,2832,2872,	2653,2732,2735,2761,2833,
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+76	18	0	0	1	37	1	126	++	AY211386	4952	2799	2930	NM_033086	4952	2657	2877	3	27,25,42,	2799,2863,2888,	2657,2684,2835,
+74	16	0	0	2	79	1	4	++	AY211386	4952	2699	2868	NM_033086	4952	2653	2747	3	31,44,15,	2699,2803,2853,	2653,2684,2732,
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+3033	2	0	0	0	0	1	1667	++	BC032429	3224	130	3165	NM_033086	4952	247	4949	2	2002,1033,	130,2132,	247,3916,
+1647	0	0	0	1	1	0	0	++	BC046356	1890	177	1825	NM_005014	2263	7	1654	2	79,1568,	177,257,	7,86,
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+1297	13	0	0	2	3	3	1669	++	AX810690	1348	14	1327	NM_033086	4952	1972	4951	6	30,194,52,382,103,549,	14,45,239,291,673,778,	1972,2002,2197,3916,4299,4402,