02336754147822f5aa61ba13277123b2cc629001
markd
  Thu May 20 08:38:55 2021 -0700
Moved pslMap, pslMapPostChain, pslRc, pslSwap to src/utils, as they do not have hg/lib dependencies.

diff --git src/utils/pslSwap/tests/expected/mrnaTest.psl src/utils/pslSwap/tests/expected/mrnaTest.psl
new file mode 100644
index 0000000..0cabd62
--- /dev/null
+++ src/utils/pslSwap/tests/expected/mrnaTest.psl
@@ -0,0 +1,7 @@
+3004	6	0	0	12	267516	0	0	+	chr5	180857866	75414994	75685520	AK094917	3011	1	3011	13	99,681,181,152,134,90,111,89,165,134,204,160,810,	75414994,75463230,75526499,75541316,75616742,75617361,75622801,75623348,75627358,75630374,75632309,75632966,75684710,	1,100,781,962,1114,1248,1338,1449,1538,1703,1837,2041,2201,
+1913	0	0	0	1	2323	0	0	-	chr5	180857866	75501665	75505901	CR611640	1913	0	1913	2	1229,684,	105351965,105355517,	0,1229,
+1916	0	0	0	1	2323	0	0	-	chr5	180857866	75501665	75505904	CR617598	1916	0	1916	2	1232,684,	105351962,105355517,	0,1232,
+1929	0	0	0	1	2323	0	0	-	chr5	180857866	75501665	75505917	CR590134	1929	0	1929	2	1245,684,	105351949,105355517,	0,1245,
+1938	0	0	0	1	2323	0	0	-	chr5	180857866	75501666	75505927	CR593875	1938	0	1938	2	1255,683,	105351939,105355517,	0,1255,
+1546	0	0	0	1	2323	0	0	-	chr5	180857866	75501670	75505539	CR605282	1546	0	1546	2	867,679,	105352327,105355517,	0,867,
+1894	0	0	0	1	2323	0	0	-	chr5	180857866	75501686	75505903	CR594687	1894	0	1894	2	1231,663,	105351963,105355517,	0,1231,