02336754147822f5aa61ba13277123b2cc629001 markd Thu May 20 08:38:55 2021 -0700 Moved pslMap, pslMapPostChain, pslRc, pslSwap to src/utils, as they do not have hg/lib dependencies. diff --git src/utils/pslMap/tests/input/mrnaToMm6.psl src/utils/pslMap/tests/input/mrnaToMm6.psl new file mode 100644 index 0000000..21d3f67 --- /dev/null +++ src/utils/pslMap/tests/input/mrnaToMm6.psl @@ -0,0 +1,2 @@ +1757 0 0 0 0 0 12 5434 - NM_009377 1757 0 1757 chr7 139739827 137305795 137312986 13 415,134,96,57,70,136,146,51,68,89,175,225,95, 0,415,549,645,702,772,908,1054,1105,1173,1262,1437,1662, 137305795,137307027,137307412,137307660,137308108,137308336,137308542,137309048,137309430,137309613,137309947,137310985,137312891, +1757 0 0 0 0 0 12 5434 - NM_009377 1757 0 1757 chr7fake 139739827 137305795 137312986 13 415,134,96,57,70,136,146,51,68,89,175,225,95, 0,415,549,645,702,772,908,1054,1105,1173,1262,1437,1662, 137305795,137307027,137307412,137307660,137308108,137308336,137308542,137309048,137309430,137309613,137309947,137310985,137312891,