02336754147822f5aa61ba13277123b2cc629001
markd
  Thu May 20 08:38:55 2021 -0700
Moved pslMap, pslMapPostChain, pslRc, pslSwap to src/utils, as they do not have hg/lib dependencies.

diff --git src/utils/pslRc/tests/expected/mrnaTest.psl src/utils/pslRc/tests/expected/mrnaTest.psl
new file mode 100644
index 0000000..fbbb7b3
--- /dev/null
+++ src/utils/pslRc/tests/expected/mrnaTest.psl
@@ -0,0 +1,7 @@
+3004	6	0	0	0	0	12	267516	--	AK094917	3011	1	3011	chr5	180857866	75414994	75685520	13	810,160,204,134,165,89,111,90,134,152,181,681,99,	0,810,970,1174,1308,1473,1562,1673,1763,1897,2049,2230,2911,	105172346,105224740,105225353,105227358,105230343,105234429,105234954,105240415,105240990,105316398,105331186,105393955,105442773,
+1913	0	0	0	0	0	1	2323	+-	CR611640	1913	0	1913	chr5	180857866	75501665	75505901	2	1229,684,	0,1229,	105351965,105355517,
+1916	0	0	0	0	0	1	2323	+-	CR617598	1916	0	1916	chr5	180857866	75501665	75505904	2	1232,684,	0,1232,	105351962,105355517,
+1929	0	0	0	0	0	1	2323	+-	CR590134	1929	0	1929	chr5	180857866	75501665	75505917	2	1245,684,	0,1245,	105351949,105355517,
+1938	0	0	0	0	0	1	2323	+-	CR593875	1938	0	1938	chr5	180857866	75501666	75505927	2	1255,683,	0,1255,	105351939,105355517,
+1546	0	0	0	0	0	1	2323	+-	CR605282	1546	0	1546	chr5	180857866	75501670	75505539	2	867,679,	0,867,	105352327,105355517,
+1894	0	0	0	0	0	1	2323	+-	CR594687	1894	0	1894	chr5	180857866	75501686	75505903	2	1231,663,	0,1231,	105351963,105355517,