02336754147822f5aa61ba13277123b2cc629001
markd
  Thu May 20 08:38:55 2021 -0700
Moved pslMap, pslMapPostChain, pslRc, pslSwap to src/utils, as they do not have hg/lib dependencies.

diff --git src/utils/pslSwap/tests/input/mrna.psl src/utils/pslSwap/tests/input/mrna.psl
new file mode 100644
index 0000000..0f28747
--- /dev/null
+++ src/utils/pslSwap/tests/input/mrna.psl
@@ -0,0 +1,7 @@
+3004	6	0	0	0	0	12	267516	+	AK094917	3011	1	3011	chr5	180857866	75414994	75685520	13	99,681,181,152,134,90,111,89,165,134,204,160,810,	1,100,781,962,1114,1248,1338,1449,1538,1703,1837,2041,2201,	75414994,75463230,75526499,75541316,75616742,75617361,75622801,75623348,75627358,75630374,75632309,75632966,75684710,
+1913	0	0	0	0	0	1	2323	-	CR611640	1913	0	1913	chr5	180857866	75501665	75505901	2	684,1229,	0,684,	75501665,75504672,
+1916	0	0	0	0	0	1	2323	-	CR617598	1916	0	1916	chr5	180857866	75501665	75505904	2	684,1232,	0,684,	75501665,75504672,
+1929	0	0	0	0	0	1	2323	-	CR590134	1929	0	1929	chr5	180857866	75501665	75505917	2	684,1245,	0,684,	75501665,75504672,
+1938	0	0	0	0	0	1	2323	-	CR593875	1938	0	1938	chr5	180857866	75501666	75505927	2	683,1255,	0,683,	75501666,75504672,
+1546	0	0	0	0	0	1	2323	-	CR605282	1546	0	1546	chr5	180857866	75501670	75505539	2	679,867,	0,679,	75501670,75504672,
+1894	0	0	0	0	0	1	2323	-	CR594687	1894	0	1894	chr5	180857866	75501686	75505903	2	663,1231,	0,663,	75501686,75504672,