The hub.txt file (if not using the useOneFile on setting) will need to point the related genomes.txt location, which in turn points to the trackDb.txt location using these full https://data.cyverse.org/... links as well.
Please see the Using the Discovery Environment wiki page on the CyVerse wiki for more information. Please direct any questions about CyVerse or the Discovery Environment to their Contact Us page or "Chat with Cyverse support" staff directly via the blue question box icon on the top right of the Discovery Environment page.
+
+Note, if you need to replace files once they have been uploaded into CyVerse's DE and Public links
+have already been created you will need to force update the CyVerse cache by hitting Control-Shift-R
+in your browser to force reload the file or by sending Cache-Control: no-cache header: curl
+--head --header 'Cache-Control: no-cache' https://data.cyverse.org/.../dataFile.bam
Github supports byte-range access to files when they are accessed via the raw.githubusercontent.com style URLs. To obtain a raw URL to a file already uploaded on Github, click on a file in your repository and click the Raw button:
