398507e945d474a1553f783d19d1c458ddbc064b
lrnassar
  Thu Jun 10 16:10:39 2021 -0700
Announcing ensembl v104 annotations, refs #27616

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 <!-- ============= 2021 archived news ============= -->
 <a name="2021"></a>
 
+<a name="061421"></a>
+<h2>Jun. 14, 2021 &nbsp;&nbsp; Updated Ensembl gene tracks for 48 assemblies (v104)</h2>
+<p>
+We are pleased to announce updated
+<a href="http://uswest.ensembl.org/info/genome/genebuild/index.html" target="_blank">
+Ensembl gene annotation</a> tracks corresponding to <strong>v104</strong> for the
+following assemblies:</p><br>
+<div class="container">
+  <div class="row">
+  <div class="col-sm-4">
+  <ul>
+        <li>Armadillo <a href="../cgi-bin/hgTrackUi?db=dasNov3&g=ensGene&position=default"
+         target=_blank>(dasNov3)</a></li>
+        <li>Baboon <a href="../cgi-bin/hgTrackUi?db=papAnu4&g=ensGene&position=default"
+         target=_blank>(papAnu4)</a></li>
+        <li>Bison <a href="../cgi-bin/hgTrackUi?db=bisBis1&g=ensGene&position=default"
+         target=_blank>(bisBis1)</a></li>
+        <li>Bonobo <a href="../cgi-bin/hgTrackUi?db=panPan2&g=ensGene&position=default"
+         target=_blank>(panPan2)</a></li>
+        <li>Budgerigar <a href="../cgi-bin/hgTrackUi?db=melUnd1&g=ensGene&position=default"
+         target=_blank>(melUnd1)</a></li>
+        <li>Bushbaby <a href="../cgi-bin/hgTrackUi?db=otoGar3&g=ensGene&position=default"
+         target=_blank>(otoGar3)</a></li>
+        <li>C. elegans <a href="../cgi-bin/hgTrackUi?db=ce11&g=ensGene&position=default"
+         target=_blank>(ce11)</a></li>
+        <li>C. intestinalis <a href="../cgi-bin/hgTrackUi?db=ci3&g=ensGene&position=default"
+         target=_blank>(ci3)</a></li>
+        <li>Cat <a href="../cgi-bin/hgTrackUi?db=felCat9&g=ensGene&position=default"
+         target=_blank>(felCat9)</a></li>
+        <li>Chicken <a href="../cgi-bin/hgTrackUi?db=galGal6&g=ensGene&position=default"
+         target=_blank>(galGal6)</a></li>
+        <li>Chimp <a href="../cgi-bin/hgTrackUi?db=panTro5&g=ensGene&position=default"
+         target=_blank>(panTro5)</a></li>
+        <li>Chinese hamster <a href="../cgi-bin/hgTrackUi?db=criGriChoV1&g=ensGene&position=default"
+         target=_blank>(criGriChoV1)</a></li>
+        <li>Chinese hamster <a href="../cgi-bin/hgTrackUi?db=criGriChoV2&g=ensGene&position=default"
+         target=_blank>(criGriChoV2)</a></li>
+        <li>Coelacanth <a href="../cgi-bin/hgTrackUi?db=latCha1&g=ensGene&position=default"
+         target=_blank>(latCha1)</a></li>
+        <li>Cow <a href="../cgi-bin/hgTrackUi?db=bosTau9&g=ensGene&position=default"
+         target=_blank>(bosTau9)</a></li>
+        <li>D. melanogaster <a href="../cgi-bin/hgTrackUi?db=dm6&g=ensGene&position=default"
+         target=_blank>(dm6)</a></li>
+  </ul></div>
+  <div class="col-sm-4">
+  <ul>
+        <li>Dog <a href="../cgi-bin/hgTrackUi?db=canFam3&g=ensGene&position=default"
+         target=_blank>(canFam3)</a></li>
+        <li>Dog <a href="../cgi-bin/hgTrackUi?db=canFam5&g=ensGene&position=default"
+         target=_blank>(canFam5)</a></li>
+        <li>Elephant <a href="../cgi-bin/hgTrackUi?db=loxAfr3&g=ensGene&position=default"
+         target=_blank>(loxAfr3)</a></li>
+        <li>Elephant shark <a href="../cgi-bin/hgTrackUi?db=calMil1&g=ensGene&position=default"
+         target=_blank>(calMil1)</a></li>
+        <li>Ferret <a href="../cgi-bin/hgTrackUi?db=musFur1&g=ensGene&position=default"
+         target=_blank>(musFur1)</a></li>
+        <li>Gibbon <a href="../cgi-bin/hgTrackUi?db=nomLeu3&g=ensGene&position=default"
+         target=_blank>(nomLeu3)</a></li>
+        <li>Golden snub-nosed monkey <a href="../cgi-bin/hgTrackUi?db=rhiRox1&g=ensGene&position=default"
+         target=_blank>(rhiRox1)</a></li>
+        <li>Gorilla <a href="../cgi-bin/hgTrackUi?db=gorGor4&g=ensGene&position=default"
+         target=_blank>(gorGor4)</a></li>
+        <li>Green monkey <a href="../cgi-bin/hgTrackUi?db=chlSab2&g=ensGene&position=default"
+         target=_blank>(chlSab2)</a></li>
+        <li>Guinea pig <a href="../cgi-bin/hgTrackUi?db=cavPor3&g=ensGene&position=default"
+         target=_blank>(cavPor3)</a></li>
+        <li>Horse <a href="../cgi-bin/hgTrackUi?db=equCab3&g=ensGene&position=default"
+         target=_blank>(equCab3)</a></li>
+        <li>Lamprey <a href="../cgi-bin/hgTrackUi?db=petMar2&g=ensGene&position=default"
+         target=_blank>(petMar2)</a></li>
+        <li>Lizard <a href="../cgi-bin/hgTrackUi?db=anoCar2&g=ensGene&position=default"
+         target=_blank>(anoCar2)</a></li>
+        <li>Medium ground finch <a href="../cgi-bin/hgTrackUi?db=geoFor1&g=ensGene&position=default"
+         target=_blank>(geoFor1)</a></li>
+        <li>Microbat <a href="../cgi-bin/hgTrackUi?db=myoLuc2&g=ensGene&position=default"
+         target=_blank>(myoLuc2)</a></li>
+        <li>Mouse <a href="../cgi-bin/hgTrackUi?db=mm39&g=ensGene&position=default"
+         target=_blank>(mm39)</a></li>
+  </ul></div>
+  <div class="col-sm-4">
+  <ul>
+        <li>Naked mole-rat <a href="../cgi-bin/hgTrackUi?db=hetGla1&g=ensGene&position=default"
+         target=_blank>(hetGla1)</a></li>
+        <li>Naked mole-rat <a href="../cgi-bin/hgTrackUi?db=hetGla2&g=ensGene&position=default"
+         target=_blank>(hetGla2)</a></li>
+        <li>Orangutan <a href="../cgi-bin/hgTrackUi?db=ponAbe2&g=ensGene&position=default"
+         target=_blank>(ponAbe2)</a></li>
+        <li>Panda <a href="../cgi-bin/hgTrackUi?db=ailMel1&g=ensGene&position=default"
+         target=_blank>(ailMel1)</a></li>
+        <li>Pig <a href="../cgi-bin/hgTrackUi?db=susScr11&g=ensGene&position=default"
+         target=_blank>(susScr11)</a></li>
+        <li>Rabbit <a href="../cgi-bin/hgTrackUi?db=oryCun2&g=ensGene&position=default"
+         target=_blank>(oryCun2)</a></li>
+        <li>Rat <a href="../cgi-bin/hgTrackUi?db=rn6&g=ensGene&position=default"
+         target=_blank>(rn6)</a></li>
+        <li>Rhesus <a href="../cgi-bin/hgTrackUi?db=rheMac10&g=ensGene&position=default"
+         target=_blank>(rheMac10)</a></li>
+        <li>S. cerevisiae <a href="../cgi-bin/hgTrackUi?db=sacCer3&g=ensGene&position=default"
+         target=_blank>(sacCer3)</a></li>
+        <li>Sheep <a href="../cgi-bin/hgTrackUi?db=oviAri3&g=ensGene&position=default"
+         target=_blank>(oviAri3)</a></li>
+        <li>Squirrel <a href="../cgi-bin/hgTrackUi?db=speTri2&g=ensGene&position=default"
+         target=_blank>(speTri2)</a></li>
+        <li>Squirrel monkey <a href="../cgi-bin/hgTrackUi?db=saiBol1&g=ensGene&position=default"
+         target=_blank>(saiBol1)</a></li>
+        <li>Tarsier <a href="../cgi-bin/hgTrackUi?db=tarSyr2&g=ensGene&position=default"
+         target=_blank>(tarSyr2)</a></li>
+        <li>Tetraodon <a href="../cgi-bin/hgTrackUi?db=tetNig2&g=ensGene&position=default"
+         target=_blank>(tetNig2)</a></li>
+        <li>Turkey <a href="../cgi-bin/hgTrackUi?db=melGal5&g=ensGene&position=default"
+         target=_blank>(melGal5)</a></li>
+        <li>X. tropicalis <a href="../cgi-bin/hgTrackUi?db=xenTro9&g=ensGene&position=default"
+         target=_blank>(xenTro9)</a></li>
+  </ul></div>
+</div></div>
+<p>
+Thanks to Ensembl for providing these annotations, as well as
+Hiram Clawson and Lou Nassar of the UCSC Genome Browser group for their
+work in creating and releasing these tracks.</p>
+
 <a name="061021"></a>
 <h2>Jun. 10, 2021 &nbsp;&nbsp; Updated data for NCBI RefSeq tracks for human assembly hg19</h2>
 <p>
 We are pleased to announce the updated  <a href="https://www.ncbi.nlm.nih.gov/genome/annotation_euk/
 Homo_sapiens/109.20190905/#:~:text=NCBI%20Homo%20sapiens%20Updated%20Annotation%20Release%
 20105.20201022&text=Updated%20Annotation%20Release%20105.20201022%20is,to%20update%20the%20annotated%20features"
 target="_blank">NCBI RefSeq Annotation Release 105.20201022</a> tracks for the
 <a href="http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=refSeqComposite&position=default">hg19/GRCh37</a>
 assembly. For all of these tracks, the alignments and coordinates are provided by RefSeq.
 These tracks are organized in a composite track that includes:</p>
 <ul>
   <li><b>RefSeq All</b> &ndash; all annotations from the curated and predicted sets
   <li><b>RefSeq Curated</b> &ndash; curated annotations beginning with NM, NR, or NP
   <li><b>RefSeq Other</b> &ndash; all other RefSeq annotations not included in RefSeq All
   <li><b>RefSeq Alignments</b> &ndash; alignments of transcripts to the genome provided by RefSeq