Commits for markd

v415_base to v416_preview (2021-05-24 to 2021-06-01) v416

b1a9de0fd2ebab6d3caf4197eecc2e75eb74162d Mon May 24 13:53:35 2021 -0700

• Added better handling of GTFs without correct frames on CDS. This also simplified the handling of GTF stop codons
  • src/hg/inc/genePred.h - lines changed 6, context: html, text, full: html, text
  • src/hg/lib/genePred.c - lines changed 173, context: html, text, full: html, text
  • src/hg/utils/gtfToGenePred/gtfToGenePred.c - lines changed 3, context: html, text, full: html, text
  • src/hg/utils/gtfToGenePred/tests/expected/noFrame.gp - lines changed 8, context: html, text, full: html, text
  • src/hg/utils/gtfToGenePred/tests/expected/noFrame.info - lines changed 9, context: html, text, full: html, text
  • src/hg/utils/gtfToGenePred/tests/input/noFrame.gtf - lines changed 122, context: html, text, full: html, text
  • src/hg/utils/gtfToGenePred/tests/makefile - lines changed 10, context: html, text, full: html, text