5be8770a26878928217c735aa67fc78cc1361d91 braney Tue Jun 1 15:51:50 2021 -0700 add cartVersion trackDb entry on alpha and user targets diff --git src/hg/makeDb/trackDb/makefile src/hg/makeDb/trackDb/makefile index 215e5f2..1d013a5 100644 --- src/hg/makeDb/trackDb/makefile +++ src/hg/makeDb/trackDb/makefile @@ -205,51 +205,51 @@ # BUILD_TRIX = /bin/true BUILD_TRIX = ./buildTrix HIVE_TRIX = /hive/data/inside/trix DATA_TRIX = /data/trix ALPHA_MACHINE = hgwdev.gi.ucsc.edu BETA_MACHINE = qateam@hgwbeta.soe.ucsc.edu PUBLIC_MACHINE = qateam@hgw0.soe.ucsc.edu # For the new demo-$USER machines, the "USER" passed in to makefile contains a hyphen which # needs to be replaced with an underscore for mysql table names. USERTABLE = $(shell echo ${USER} | sed -e 's/-/_/g') update: ${DBS:%=%_update} ${MKDIR} ${CGI_BIN}-${USER}/encode %_update: - ./loadTracks ${EXTRA} trackDb_${USERTABLE} hgFindSpec_${USERTABLE} $* + ./loadTracks -addVersion ${EXTRA} trackDb_${USERTABLE} hgFindSpec_${USERTABLE} $* ./checkMetaDb alpha metaDb_${USERTABLE} $* # now build the relatedTracks table for each db ./buildRelatedTracks relatedTrack_${USERTABLE} $* rm -rf /dev/shm/trackDbCache/$*.trackDb_${USERTABLE} # if you want to test track search tool with your own trix file # rm -f ${DBS:%=${HIVE_TRIX}/%_trackDb_${USERTABLE}.{ixx,ix}} # HGDB_TRACKDB=trackDb_${USERTABLE} ${BUILD_TRIX} trackDb_${USERTABLE} metaDb_${USERTABLE} ${CGI_BIN}-${USER}/encode/cv.ra ${ALPHA_MACHINE} ${HIVE_TRIX} ${DBS} # you'll also need to set browser.trixPath to point to your trix file # see kent/src/product/ex.hg/conf for details alpha: clean ${GIT} pull ${MKDIR} ${CGI_BIN}/encode ${MAKE} alpha_all alpha_all: ${DBS:%=%_alpha} %_alpha: - ./loadTracks ${EXTRA} -release=alpha trackDb hgFindSpec $* + ./loadTracks -addVersion ${EXTRA} -release=alpha trackDb hgFindSpec $* ./checkMetaDb alpha metaDb $* rm -f ${HIVE_TRIX}/$*_trackDb.{ixx,ix}} HGDB_TRACKDB=trackDb ${BUILD_TRIX} trackDb metaDb cv/alpha/cv.ra ${ALPHA_MACHINE} ${HIVE_TRIX} $* ./makeTrixLinks trackDb ${HIVE_TRIX} $* # now build the relatedTracks table for each db ./buildRelatedTracks relatedTrack $* rm -rf /dev/shm/trackDbCache/$*.trackDb onbeta: /cluster/home/${USER}/.hg.conf.beta betaTest: onbeta clean ${MAKE} betaTest_all betaTest_all: ${DBS:%=%_betaTest}