8cbd73320598db4c37c75666e518622f82fbc326
markd
  Sun Jun 6 20:53:15 2021 -0700
added option for chromToUcsc to skip unmapped chromosomes rather than error

diff --git src/utils/chromToUcsc/tests/expected/mm10.bad-names.err src/utils/chromToUcsc/tests/expected/mm10.bad-names.err
new file mode 100644
index 0000000..aeba732
--- /dev/null
+++ src/utils/chromToUcsc/tests/expected/mm10.bad-names.err
@@ -0,0 +1,3 @@
+WARNING:root:line 2: chrom name 'NCC-1701' is not in chromAlias table
+WARNING:root:line 4: chrom name 'NCC-1701-D' is not in chromAlias table
+WARNING:root:line 5: chrom name 'NCC-1701-E' is not in chromAlias table