e0d0dd65f53bb547c201ae1aa2bf0fa6dbbafe09 max Thu Jun 3 08:25:17 2021 -0700 changes after code review, refs #27648 diff --git build/kent-core/README.md build/kent-core/README.md index acc81b9..cdb0498 100644 --- build/kent-core/README.md +++ build/kent-core/README.md @@ -4,21 +4,24 @@ redistributed and modified as needed by other projects. The code should build with a simple "cd src; make utils". We test this on CentOS and OSX. If you run into problems, please open a ticket or contact genome@soe.ucsc.edu. If you want to file issues or pull-requests, please do that at the original repo, at https://github.com/ucscGenomeBrowser/kent/, not here. The changes will get merged into this repository automatically with the next release (see kent/build/kent-core/). You can find short descriptions for most tools here: http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/FOOTER.txt Here are a few selected tools that are useful when building track and assembly hubs: bedToBigBed - create a bigBed file for rectangle-shaped annotations (genes, enhancers, promoters, etc) -bigBedToBed - the inverse of bedToBigBed -bigBedInfo - Show information about a bigBed file. Can extract .autoSql field definitions. -wigToBigWig - create a bigWig file for signal (barchart) annotations from a .wig file -bigWigToWig - the inverse of wigToBigWig -bigWigInfo - show information about bigWig files +|Tool |Description | +|---|---| +|bedToBigBed | create a bigBed file for rectangle-shaped annotations (genes, enhancers, promoters, etc) | +|bigBedToBed | the inverse of bedToBigBed | +|bigBedInfo | Show information about a bigBed file. Can extract .autoSql field definitions | +|wigToBigWig | create a bigWig file for signal (barchart) annotations from a .wig file | +|bigWigToWig | the inverse of wigToBigWig | +|bigWigInfo | show information about bigWig files |