7b6820b4e32bf5c1a9996acaae3547e236ccd15e brianlee Mon Jun 28 14:16:40 2021 -0700 Trying to track down htmlCheck validate goldenPath/newsarch.html report of a missing </a> tag before announcing TrackDb Versioning. diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index d5a9139..dc14502 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -3191,32 +3191,31 @@ <li>Tibetan frog <a href="../cgi-bin/hgTrackUi?db=nanPar1&g=refSeqComposite" target=_blank>(nanPar1)</a></li> <li>White rhinoceros <a href="../cgi-bin/hgTrackUi?db=cerSim1&g=refSeqComposite" target=_blank>(cerSim1)</a></li> <li>Zebrafish <a href="../cgi-bin/hgTrackUi?db=danRer11&g=refSeqComposite" target=_blank>(danRer11)</a></li> </ul></div> </div></div> <p> Thanks to <a target="_blank" href="https://www.ncbi.nlm.nih.gov/refseq/"> NCBI RefSeq</a> for providing these annotations. We would also like to thank Hiram Clawson and Lou Nassar of the UCSC Genome Browser group for their work in creating and releasing these tracks.</p> -<a name="042820"></a -> +<a name="042820"></a> <h2>Apr. 28, 2020 gnomAD Constraint Metrics and Structural Variants data now available on human (GRCh37/hg19) assembly</h2> <p> We are pleased to announce two new Genome Aggregation Database (gnomAD) tracks, <a target="_blank"href="../../cgi-bin/hgTrackUi?db=hg19&c=chrX&g=gnomadPLI">Predicted Constraint Metrics</a> and <a target="_blank"href="../../cgi-bin/hgTrackUi?db=hg19&c=chrX&g=gnomadStructuralVariants">Structural Variants</a>, for the human (GRCh37/hg19) assembly. </p> <h3>Predicted Constraint Metrics</h3> <p> These data show various metrics of pathogenicity per-gene as predicted for gnomAD v2.1.1 and identifies genes subject to strong selection against various classes of mutation. It is comprised of three subtracks: @@ -8651,31 +8650,31 @@ We are pleased to announce the release of a Genome Browser for the June 2014 assembly of cow, <i>Bos taurus</i> (Bos_taurus_UMD 3.1.1, UCSC version bosTau8). This updated cow assembly was provided by the <a href="http://www.cbcb.umd.edu/" target="_blank">UMD Center for Bioinformatics and Computational Biology</a> (CBCB). This assembly is an update to the previous UMD 3.1 (bosTau6) assembly. UMD 3.1 contained 138 unlocalized contigs that were found to be contaminants. These have been suppressed in UMD 3.1.1.</p> <p> Bulk downloads of the sequence and annotation data are available via the Genome Browser <a href="ftp://hgdownload.soe.ucsc.edu/goldenPath/bosTau8/">FTP server</a> or the <a href="http://hgdownload.soe.ucsc.edu/downloads.html#cow">Downloads</a> page. These data have <a href="/goldenPath/credits.html#cow_credits">specific conditions for use</a>. The cow browser annotation tracks were generated by UCSC and collaborators worldwide. See the <a href="/goldenPath/credits.html#cow_credits">Credits</a> page for a detailed list of the organizations and individuals who contributed to this release.</p> -<a name="121214"> +<a name="121214"></a> <h2>Dec. 12, 2014 New <em>D. melanogaster</em> (dm6) assembly now available</h2> <p> We are pleased to announce the release of a Genome Browser for the August 2014 assembly of <em>Drosophila melanogaster</em> (BDGP Release 6, UCSC version dm6). This updated <em>D. melanogaster</em> assembly was provided by the <a href="http://www.fruitfly.org/" target="_blank">Berkeley Drosophila Genome Project</a> (BDGP). Please see <a href="http://flybase.org/static_pages/feature/previous/articles/2014_07/FB2014_04.html" target="_blank">this announcement</a> on the FlyBase website for more details about this updated <em>D. melanogaster</em> assembly.</p> <p> Bulk downloads of the sequence and annotation data are available via the Genome Browser <a href="ftp://hgdownload.soe.ucsc.edu/goldenPath/dm6/">FTP server</a> or the <a href="http://hgdownload.soe.ucsc.edu/downloads.html#fruitfly">Downloads</a> page. These data have <a href="/goldenPath/credits.html#dm_credits">specific conditions for use</a>. The <i>D. melanogaster</i> (dm6) browser annotation tracks were generated by UCSC and collaborators