ab2397a17e14b1ba1c9deb7481eadfc08d58b966
galt
  Fri Jul 2 11:32:20 2021 -0700
mm10.2bit and tables on RR, update GRCIncident db

diff --git src/hg/makeDb/doc/mm10.patchUpdate.6.txt src/hg/makeDb/doc/mm10.patchUpdate.6.txt
index 8018b6b..3e3f35e 100644
--- src/hg/makeDb/doc/mm10.patchUpdate.6.txt
+++ src/hg/makeDb/doc/mm10.patchUpdate.6.txt
@@ -587,31 +587,31 @@
 sort -k1,1 -k2n,2n $f.bed $f.p6.bed > $f.plusP6.bed
 
 bedToBigBed -tab -type=bed9+6 -as=$lib/$f.as $f.plusP6.bed /hive/data/genomes/mm10/chrom.sizes $f.bb
 
 ln -fs `pwd`/$f.bb /gbdb/mm10/encode3/ccre
 
 
 
 ##############################################################################
 # Extend Single Cell RNA-Seq Gene Expression from Tabula Muris  (DONE - 2021-06-15 - Galt)
 #
 # REJECTED this is Max's track and he did not think it is worth the effort.
 
 
 ##############################################################################
-# GRC Incident Database (TODO - 2021-06-15 - Galt)
+# GRC Incident Database (DONE - 2021-06-15 - Galt)
 
     # Wait until the updated mm10 files have been pushed to RR because GRC Incident update is
     # automated.  Then update the file used to map GRC's RefSeq accessions to our names:
     hgsql mm10 -NBe 'select alias,chrom from chromAlias where source = "refseq" order by alias;' \
       > /hive/data/outside/grc/incidentDb/GRCm38/refSeq.chromNames.tab
 
 
 ##############################################################################
 We do not have to liftoever wgEncodeGencode* tables.
 They are automatically updated by some process,
 yet neither hg19 nor hg38 have Gencode data on their non-initial alts,
 so we do not have to do it either.
 
 
 ##############################################################################