File Changes for hiram

v417_preview2 to v417_base (2021-06-28 to 2021-07-05) v417

• src/hg/makeDb/doc/asmHubs/asmHubs.mk
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    9755f05c30ccecf47565cf5e7b2796cd42fc635b Mon Jun 28 14:18:49 2021 -0700
    rsync dynamic blat files to the dynablat-01 machine and add rules to test dynamic blat refs #27556
• src/hg/makeDb/doc/asmHubs/rtp1.ace2.faa.gz
  • lines changed 0, context: html, text, full: html, text
    18ca361b254102fc711e421c2056771598d6fc34 Mon Jun 28 14:18:36 2021 -0700
    rsync dynamic blat files to the dynablat-01 machine and add rules to test dynamic blat refs #27556
• src/hg/makeDb/doc/asmHubs/sendToHgdownload.sh
  • lines changed 14, context: html, text, full: html, text
    9755f05c30ccecf47565cf5e7b2796cd42fc635b Mon Jun 28 14:18:49 2021 -0700
    rsync dynamic blat files to the dynablat-01 machine and add rules to test dynamic blat refs #27556
• src/hg/makeDb/doc/asmHubs/testDynBlat.sh
  • lines changed 64, context: html, text, full: html, text
    18ca361b254102fc711e421c2056771598d6fc34 Mon Jun 28 14:18:36 2021 -0700
    rsync dynamic blat files to the dynablat-01 machine and add rules to test dynamic blat refs #27556
  • lines changed 34, context: html, text, full: html, text
    27268fcd94123d7c1fe0cd4f30c3520978fcd46e Mon Jun 28 14:20:57 2021 -0700
    eliminate test junk refs #27556
  • lines changed 6, context: html, text, full: html, text
    9e3ba7e02f241e806c6a656329ea8aee730d000b Mon Jun 28 15:09:07 2021 -0700
    indicate error when dynamic blat does not respond refs #27556
• src/hg/makeDb/doc/bacteriaAsmHub/bacteria.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    d7397434548b97dca7543c9fc2f46b5901d2c6e4 Wed Jun 30 12:29:01 2021 -0700
    adding GCF_000009045.1_ASM904v1 Bacillus subtilis strain 168 per user request refs #27790
• src/hg/makeDb/doc/gorGor5/initialBuild.txt
  • lines changed 92, context: html, text, full: html, text
    1b810c39a0876696d70ef6787bb0a3e029f2ca57 Mon Jul 5 07:57:33 2021 -0700
    adding chromAlias table and chromAlias.txt file no redmine
• src/hg/makeDb/doc/hg19.txt
  • lines changed 20, context: html, text, full: html, text
    2fdcabb36f9906a0bbb8e6c2c2fbe43e32543946 Tue Jun 29 11:14:10 2021 -0700
    ncbiRefSeq update refs #27552
• src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv
  • lines changed 41, context: html, text, full: html, text
    b52d9c0661e61818af15e7ceb544e0790c94e2ab Mon Jun 28 14:24:03 2021 -0700
    adding the mouse strains to the GenArk refs #27754
• src/hg/utils/automation/chromAliasToTxt.pl
  • lines changed 39, context: html, text, full: html, text
    9578d5ecb6f52b870b436a05ba64844e801b1853 Fri Jul 2 15:33:47 2021 -0700
    to convert chromAlias table to text version for download directory no redmine