b1ae66fdc9611229b379edc06fa5fb78cc03d45f gperez2 Thu Jun 17 14:12:32 2021 -0700 Renaming the caddAlpha.ra file, refs #27589 diff --git src/hg/makeDb/trackDb/human/cadd.ra src/hg/makeDb/trackDb/human/cadd.ra index 4fa258b..69377d6 100644 --- src/hg/makeDb/trackDb/human/cadd.ra +++ src/hg/makeDb/trackDb/human/cadd.ra @@ -1,94 +1,94 @@ track caddSuper shortLabel CADD longLabel CADD 1.6 Score for all single-basepair mutations and selected insertions/deletions superTrack on hide type bed visibility hide group phenDis color 100,130,160 track cadd -shortLabel Single-bp mutations -longLabel CADD 1.6 Score for all possible single-basepair mutation - Mouse over to show score - Reference nucleotide: score = 0.0) +shortLabel CADD +longLabel CADD 1.6 Score for all possible single-basepair mutations (zoom in to show exact score on mouse over, same basepair = score 0.0) type bigWig compositeTrack on parent caddSuper visibility dense #maxWindowToQuery 500000 group phenDis color 100,130,160 html caddSuper maxWindowToDraw 10000000 mouseOverFunction noAverage track caddA shortLabel Mutation: A longLabel CADD 1.6 Score: Mutation is A type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/a.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddC shortLabel Mutation: C longLabel CADD 1.6 Score: Mutation is C type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/c.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddG shortLabel Mutation: G longLabel CADD 1.6 Score: Mutation is G type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/g.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddT shortLabel Mutation: T longLabel CADD 1.6 Score: Mutation is T type bigWig parent cadd on visibility dense bigDataUrl /gbdb/$D/cadd/t.bw maxHeightPixels 128:20:8 viewLimits 0:30 viewLimitsMax 0:100 track caddIns shortLabel Insertions longLabel CADD 1.6 Score: Insertions - label is length of insertion type bigBed 9 + parent caddSuper visibility dense bigDataUrl /gbdb/$D/cadd/ins.bb mouseOver Mutation: $change CADD Phred score: $phred html caddSuper scoreFilterLimits 0:100 -maxWindowCoverage 40000 -maxItems 100000 -maxWindowToDraw 9000000 +#maxWindowCoverage 40000 +#maxItems 100000 +#maxWindowToDraw 9000000 track caddDel shortLabel Deletions longLabel CADD 1.6 Score: Deletions - label is length of deletion type bigBed 9 + parent caddSuper visibility dense bigDataUrl /gbdb/$D/cadd/del.bb mouseOver Mutation: $change CADD Phred score: $phred html caddSuper scoreFilterLimits 0:100 -maxWindowCoverage 40000 -maxItems 100000 -maxWindowToDraw 9000000 +#maxWindowCoverage 40000 +#maxItems 100000 +#maxWindowToDraw 9000000