9a6328c45c6b94efdceaebd999984eefc43dd857
chmalee
  Tue Jul 27 12:22:05 2021 -0700
Forgot to check for successful mapping of hgvs when allowing multiple transcripts, refs #15554

diff --git src/hg/lib/hgFind.c src/hg/lib/hgFind.c
index 7a96842..c2b7e24 100644
--- src/hg/lib/hgFind.c
+++ src/hg/lib/hgFind.c
@@ -2737,34 +2737,44 @@
 {
 boolean foundIt = FALSE;
 struct hgvsVariant *hgvsList = hgvsParseTerm(term);
 if (hgvsList == NULL)
     hgvsList = hgvsParsePseudoHgvs(db, term);
 if (hgvsList)
     {
     struct hgvsVariant *hgvs = NULL;
     int hgvsListLen = slCount(hgvs);
     struct hgPosTable *table;
     AllocVar(table);
     table->description = "HGVS";
     struct dyString *dyWarn = dyStringNew(0);
     for (hgvs = hgvsList; hgvs != NULL; hgvs = hgvs->next)
         {
+        dyStringClear(dyWarn);
         char *pslTable = NULL;
         struct bed *mapping = hgvsValidateAndMap(hgvs, db, term, dyWarn, &pslTable);
-        if (hgvsListLen == 1 && dyStringLen(dyWarn) > 0)
+        if (dyStringLen(dyWarn) > 0)
+            {
+            if (hgvsListLen == 1)
+                {
                 warn("%s", dyStringContents(dyWarn));
+                }
+            else
+                {
+                continue;
+                }
+            }
         if (mapping)
             {
             int padding = 5;
             char *trackTable;
             if (isEmpty(pslTable))
                 trackTable = "chromInfo";
             else if (startsWith("lrg", pslTable))
                 trackTable = "lrgTranscriptAli";
             else if (startsWith("wgEncodeGencode", pslTable))
                 trackTable = pslTable;
             else if (startsWith("ncbiRefSeqPsl", pslTable))
                 {
                 if (startsWith("NM_", hgvs->seqAcc) || startsWith("NR_", hgvs->seqAcc) ||
                     startsWith("NP_", hgvs->seqAcc) || startsWith("YP_", hgvs->seqAcc))
                     trackTable = "ncbiRefSeqCurated";