970443639c19a0b93218f0a9ee13d8743f62dd5a
lrnassar
  Tue Jul 27 14:27:28 2021 -0700
Adding the otto crontab to the kent tree, no RM

diff --git src/hg/utils/otto/otto.crontab src/hg/utils/otto/otto.crontab
new file mode 100644
index 0000000..8fdaa4f
--- /dev/null
+++ src/hg/utils/otto/otto.crontab
@@ -0,0 +1,45 @@
+#Below is the otto crontab active in the otto-meister's own cron
+#Changes here must be copied over by the current otto-meister
+
+#######################################################
+###################### OTTO ###########################
+#######################################################
+
+#  for otto
+SHELL=/bin/sh
+PATH=/cluster/bin/scripts:/cluster/bin/x86_64:/usr/local/bin:/bin:/usr/bin
+MAILTO=lrnassar@ucsc.edu
+
+# otto stuff
+31 4 * * *  /hive/data/outside/otto/isca/iscaWrapper.sh 2>&1
+MAILTO=max@soe.ucsc.edu,lrnassar@ucsc.edu
+17 4 * * *  /hive/data/outside/otto/omim/omimWrapper.sh 2>&1
+MAILTO=lrnassar@ucsc.edu
+0 5 1 */3 * mail -s "OMIM/GWAS CHECK - DID DBSNP UPDATE?" lrnassar@ucsc.edu < /cluster/home/chmalee/crontabs/dbSnpCheck.txt
+#11 4 * * *  /hive/data/outside/otto/decipher/decipherWrapper.sh
+41 4 * * 3  /hive/data/outside/otto/gwas/gwasWrapper.sh
+00 8 * * 2 /hive/data/outside/otto/geneReviews/geneReviewsWrapper.sh
+#57 9 * * tue /hive/data/outside/otto/lrg/lrgWrapper.sh
+
+# took over MAX's otto cronjobs Aug 8 2019
+MAILTO=max@soe.ucsc.edu,lrnassar@ucsc.edu
+08 00 8 * * umask 002; /hive/data/outside/otto/clinvar/doUpdate.sh
+14 13 * * mon /hive/data/outside/otto/lovd/doUpdate.sh
+#* * * * * ~max/miniconda3/envs/py3/bin/python ~max/usr/scripts/tsvSafeToBigBed /cluster/home/max/.user-annots-browser-track-c513a43ffff8.json https://docs.google.com/spreadsheets/d/1l38ypTcQH2AP2hlBmQ7kIXz1G4e33RPX-iFH1vu-utU/edit#gid=0 ~max/public_html/userAnnots/public.bb
+MAILTO=max@soe.ucsc.edu,lrnassar@ucsc.edu
+05 8 8  */3 * /hive/data/outside/otto/mastermind/buildMastermind.sh
+MAILTO=lrnassar@ucsc.edu
+13 8 2 * * /hive/data/outside/otto/dbVar/dbVarWrapper.sh
+
+HGDB_CONF=/cluster/home/lrnassar/.hg.conf.beta
+MAILTO=lrnassar@ucsc.edu
+15 05 * * *  /hive/data/outside/otto/omim/omimUploadWrapper.sh
+
+# New ClinGen jobs, different from the ISCA tracks
+MAILTO=abenet@ucsc.edu,lrnassar@ucsc.edu
+00 9 * * * /hive/data/outside/otto/clinGen/clinGenWrapper.sh
+
+# wuhCor1 uniprot otto cron by Max, May 2021
+MAILTO=max@soe.ucsc.edu,lrnassar@ucsc.edu
+00 4 * * * /hive/data/outside/otto/uniprot/covidCheck.sh
+