99e1611b9ef9337bb482a746b2d0fd50967304f6 lrnassar Thu Aug 5 15:21:31 2021 -0700 Adding genbank dbs missing from the rr list from the last few years. Ask Chris Lee or Lou Nassar for details if needed. No RM. diff --git src/hg/makeDb/genbank/etc/rr.dbs src/hg/makeDb/genbank/etc/rr.dbs index 9bb73ac..7c89971 100644 --- src/hg/makeDb/genbank/etc/rr.dbs +++ src/hg/makeDb/genbank/etc/rr.dbs @@ -4,213 +4,224 @@ # then all the other assemblies for org. Please keep this ordering! # # urgent databases hg38 hg19 mm39 mm10 rn6 rn7 # # Most recent assembly for each org # ailMel1 allMis1 anoCar2 -anoGam1 +anoGam3 apiMel2 aplCal1 aptMan1 aquChr2 balAcu1 bisBis1 -bosTau7 -bosTau8 +bosTau9 braFlo1 caeJap1 caePb2 caeRem3 calJac4 calMil1 canFam5 cavPor3 cb3 ce11 cerSim1 chlSab2 choHof1 chrPic1 ci2 criGri1 -criGriChoV1 +criGriChoV2 danRer11 dasNov3 dipOrd1 dm6 dp3 droAna2 droEre1 droGri1 droMoj2 droPer1 droSec1 droSim1 droVir2 droYak2 echTel2 -equCab2 +equCab3 eriEur2 -felCat8 +felCat9 fr3 gadMor1 galGal6 galVar1 gasAcu1 geoFor1 gorGor6 hetGla2 hg18 latCha1 loxAfr3 macEug2 macFas5 manPen1 -melGal1 +melGal5 melUnd1 micMur2 mm9 monDom5 musFur1 myoLuc2 nanPar1 nasLar1 neoSch1 nomLeu3 ochPri3 oreNil2 ornAna2 oryCun2 oryLat2 otoGar3 oviAri3 oviAri4 panPan3 panTro6 -papAnu2 +papAnu4 papHam1 petMar3 ponAbe2 ponAbe3 priPac1 proCap1 pteVam1 -rheMac8 +rheMac10 rhiRox1 sacCer3 saiBol1 sarHar1 sorAra2 speTri2 strPur2 susScr11 susScr3 taeGut2 tarSyr2 tetNig2 +thaSir1 triMan1 tupBel1 turTru2 vicPac2 xenLae2 -xenTro9 +xenTro10 # # this is the beginning of the list of secondary assemblies # anoCar1 +anoGam1 apiMel1 +bosTau8 +bosTau7 bosTau6 bosTau4 bosTau3 bosTau2 caePb1 caeRem2 calJac3 calJac1 canFam4 canFam3 canFam2 canFam1 cb1 ce10 ce6 ce4 ce2 ci1 +criGriChoV1 danRer10 danRer7 danRer6 danRer5 danRer4 danRer3 dm3 dm2 dm1 dp2 droAna1 droMoj1 droVir1 droYak1 echTel1 +equCab2 equCab1 eriEur1 +felCat8 felCat5 felCat4 felCat3 fr2 fr1 galGal5 galGal4 galGal3 galGal2 gorGor5 gorGor4 gorGor3 hetGla1 hg17 hg16 +melGal1 micMur1 mm8 mm7 monDom4 monDom1 nomLeu2 nomLeu1 ochPri2 ornAna1 oviAri1 panPan2 panPan1 panTro5 panTro4 panTro3 panTro2 panTro1 +papAnu2 petMar2 petMar1 +rheMac8 rheMac3 +rheMac2 rn5 rn4 rn3 sacCer2 sacCer1 sorAra1 strPur1 susScr2 taeGut1 tarSyr1 tetNig1 vicPac1 wuhCor1 +xenTro9 xenTro7 xenTro3 xenTro2 xenTro1