8d173a831311398255e4b096eb922d291118d950 max Thu Aug 5 09:06:55 2021 -0700 adding JSON to hgBlat as an output format, refs #27950 diff --git src/hg/hgBlat/hgBlat.c src/hg/hgBlat/hgBlat.c index d605627..538b44d 100644 --- src/hg/hgBlat/hgBlat.c +++ src/hg/hgBlat/hgBlat.c @@ -303,31 +303,31 @@ { char *db; /* Database name. */ char *genome; /* Genome name. */ boolean isTrans; /* Is tranlated to protein? */ char *host; /* Name of machine hosting server. */ char *port; /* Port that hosts server. */ char *nibDir; /* Directory of sequence files. */ int tileSize; /* gfServer -tileSize */ int stepSize; /* gfServer -stepSize */ int minMatch; /* gfServer -minMatch */ boolean isDynamic; /* is a dynamic server */ char* genomeDataDir; /* genome name for dynamic gfServer */ }; char *typeList[] = {"BLAT's guess", "DNA", "protein", "translated RNA", "translated DNA"}; -char *outputList[] = {"hyperlink", "psl", "psl no header"}; +char *outputList[] = {"hyperlink", "psl", "psl no header", "JSON"}; int minMatchShown = 0; static struct serverTable *databaseServerTable(char *db, boolean isTrans) /* Load blat table for a database */ { struct sqlConnection *conn = hConnectCentral(); char query[512]; struct sqlResult *sr; char **row; char dbActualName[32]; /* If necessary convert database description to name. */ sqlSafef(query, sizeof(query), "select name from dbDb where name = '%s'", db); if (!sqlExists(conn, query))