c5138b8f09d285273c15ad132516fbc4613a86a9
dschmelt
  Fri Aug 20 15:18:42 2021 -0700
First commit for JASAPR tracks refs #27061

diff --git src/hg/makeDb/doc/hg19.txt src/hg/makeDb/doc/hg19.txt
index ddce385..1c84120 100644
--- src/hg/makeDb/doc/hg19.txt
+++ src/hg/makeDb/doc/hg19.txt
@@ -34609,15 +34609,31 @@
     # real 69m32.058s
 
     cat fb.gorGor6.chainHg19Link.txt
     2735990533 bases of 2999027915 (91.229%) in intersection
 
     cat fb.gorGor6.chainSynHg19Link.txt
     2726237067 bases of 2999027915 (90.904%) in intersection
 
     time (doRecipBest.pl -load -workhorse=hgwdev -buildDir=`pwd` gorGor6 hg19) > rbest.log 2>&1 &
     # real    70m15.001s
 
     sed -e 's/^/    # /;' fb.gorGor6.chainRBest.Hg19.txt
     # 2694784811 bases of 2999027915 (89.855%) in intersection
 
 ##############################################################################
+
+# JASPAR Track integration by Daniel 8/20/21
+    cd ~/kent/src/hg/makeDb/trackDb 
+    v human/jaspar.ra 
+    curl http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/hg19/trackDb.txt >> human/jaspar.ra 
+    cd /gbdb/hg19
+    mkdir jaspar
+    cd jaspar
+    wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2018/hg19/JASPAR2018_hg19_all_chr.bb
+    wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_hg19.bb
+    mv JASPAR2020_hg19.bb JASPAR2020.bb
+    mv JASPAR2018_hg19_all_chr.bb JASPAR2018.bb
+    v human/jaspar.html  
+    curl http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/JASPAR2018_TFBS_help.html >> human/jaspar.html 
+
+###############################################################################