c5138b8f09d285273c15ad132516fbc4613a86a9
dschmelt
  Fri Aug 20 15:18:42 2021 -0700
First commit for JASAPR tracks refs #27061

diff --git src/hg/makeDb/doc/hg38/hg38.txt src/hg/makeDb/doc/hg38/hg38.txt
index 03a1488..262e14f 100644
--- src/hg/makeDb/doc/hg38/hg38.txt
+++ src/hg/makeDb/doc/hg38/hg38.txt
@@ -6950,15 +6950,26 @@
 #user    9m1.624s
 #sys     0m20.863s
     hgLoadChain hg38 -tIndex chainHg19ReMap remap.hg38.hg19.chain
 #Loading 5315 chains into hg38.chainHg19ReMap
     time axtChain -psl -linearGap=medium -verbose=0 remap.hg38.hg19.psl \
       /hive/data/genomes/hg38/hg38.2bit /hive/data/genomes/hg19/hg19.2bit \
       remap.axtChain.hg38.hg19.chain
 #real    2m26.333s
 #user    2m4.237s
 #sys     0m22.071s
     hgLoadChain hg38 -tIndex chainHg19ReMapAxtChain remap.axtChain.hg38.hg19.chain
 #Loading 2115 chains into hg38.chainHg19ReMapAxtChain
 
 
 #########################################################################
+
+# JASPAR Track integration by Daniel 8/20/21
+    cd /gbdb/hg38
+    mkdir jaspar
+    cd jaspar
+    wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2018/hg38/JASPAR2018_hg38_all_chr.bb
+    wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_hg38.bb
+    mv JASPAR2020_hg38.bb JASPAR2020.bb
+    mv JASPAR2018_hg38_all_chr.bb JASPAR2018.bb
+
+###############################################################################i