081663b13c9af5d19bbfb7260715a0d7bed17fd5 dschmelt Fri Aug 27 16:27:09 2021 -0700 Updating makedoc with symlinks refs #28027 diff --git src/hg/makeDb/doc/hg38/jaspar.txt src/hg/makeDb/doc/hg38/jaspar.txt index 0632a4d..16cb9ed 100644 --- src/hg/makeDb/doc/hg38/jaspar.txt +++ src/hg/makeDb/doc/hg38/jaspar.txt @@ -1,10 +1,15 @@ # JASPAR Track integration by Daniel 8/20/21 - cd /gbdb/hg38 + #trackDb copied in the hg19.txt makeDoc + cd /hive/data/genomes/hg38/bed mkdir jaspar cd jaspar wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2018/hg38/JASPAR2018_hg38_all_chr.bb wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_hg38.bb mv JASPAR2020_hg38.bb JASPAR2020.bb mv JASPAR2018_hg38_all_chr.bb JASPAR2018.bb - + cd /gbdb/hg38 + mkdir jaspar + cd jaspar + ln -s /hive/data/genomes/hg38/bed/jaspar/JASPAR2018.bb . + ln -s /hive/data/genomes/hg38/bed/jaspar/JASPAR2020.bb . ###############################################################################