77bb0b172c197a780d719f1aba70a9a88173c4c8 kuhn Wed Aug 25 12:59:52 2021 -0700 reusing the image to make a live link to the browser, so they can use it while they read the doc. pretties up the top of the page a bit, too diff --git src/hg/htdocs/goldenPath/help/hgGeneGraph.html src/hg/htdocs/goldenPath/help/hgGeneGraph.html index 21b2f4f..a8d1b49 100755 --- src/hg/htdocs/goldenPath/help/hgGeneGraph.html +++ src/hg/htdocs/goldenPath/help/hgGeneGraph.html @@ -1,32 +1,44 @@ <!DOCTYPE HTML> <!--#set var="TITLE" value="Gene and Pathways Interaction Graph User's Guide" --> <!--#set var="ROOT" value="../.." --> <!-- Relative paths to support mirror sites with non-standard GB docs install --> <!--#include virtual="$ROOT/inc/gbPageStart.html" --> <h1>Gene and Pathways Interactions Graph User's Guide</h1> <h2>Contents</h2> + +<div class="row"> +<div class="col-md-6"> <h6><a href="#intro">Introduction</a></h6> <h6><a href="#configure">Configuring the Pathway and Gene Interaction Display</a></h6> <h6><a href="#methods">Data Sources and Methods</a></h6> <h6><a href="#dataAccess">Data Access</a></h6> <h6><a href="#credits">Credits</a></h6> <h6><a href="#references">References</a></h6> +</div> + +<div class="col-md-6"> +<p> +<a href = "../../cgi-bin/hgGeneGraph?db=hg19&gene=SOD1" target = _blank> +<img class="text-center" src="../../images/hgGeneGraph.png" alt="Gene Interaction Graph" +width="50%" height="50%"></p> +</div> +</div> <a name="intro"></a> <h2>Introduction</h2> <p> The Pathways and Gene Interactions graph accompanies the "Gene Interactions" track and displays a detailed gene interaction and pathway graph based on data collected from two sources: curated pathway/protein-interaction databases and interactions found through text mining of PubMed abstracts. </p> <p> The curated data were imported from 23 pathway or protein-interaction databases (see the <a href="#methods">Methods</a> section below). Curators at these databases typically read research articles, collect protein interactions from them and store them in a