334b92a7d3c7c61af8ea9facbc7ec1c2442025fa
angie
  Thu Sep 30 09:59:38 2021 -0700
Update Nextstrain JSON URL.

diff --git src/hg/utils/otto/nextstrainNcov/doUpdate.sh src/hg/utils/otto/nextstrainNcov/doUpdate.sh
index 1f582aa..2b59b2c 100755
--- src/hg/utils/otto/nextstrainNcov/doUpdate.sh
+++ src/hg/utils/otto/nextstrainNcov/doUpdate.sh
@@ -1,27 +1,27 @@
 #!/bin/bash
 source ~/.bashrc
 set -beEu -o pipefail
 
 #	Do not modify this script, modify the source tree copy:
 #	kent/src/hg/utils/nextstrainNcov/doUpdate.sh
 
 ottoDir=/hive/data/outside/otto/nextstrainNcov
 chromSizes=/hive/data/genomes/wuhCor1/chrom.sizes
 gbdbDir=/gbdb/wuhCor1/nextstrain
 
-ncovJsonUrl='https://nextstrain.org/charon/getDataset?prefix=/ncov/global'
+ncovJsonUrl='https://nextstrain.org/charon/getDataset?prefix=/ncov/open/global'
 
 cd $ottoDir
 
 # The file is named .json, but is actually gzipped, so gunzip it.
 rm -f ncov.json
 curl -s "$ncovJsonUrl" \
 | gunzip -c > ncov.json
 curl -s -I "$ncovJsonUrl" \
 | grep Last-Mod | sed -re 's/Last-Modified: //; s/\r//;' \
    > ncov.json.date
 latestDate=$(cat ncov.json.date)
 oldDate=$(cat old.ncov.json.date)
 if [ $(date -d "$latestDate" +%s) -le $(date -d "$oldDate" +%s)  ]; then
     exit 0
 fi